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Add: Ion Mobility data to Sage Reader #113

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@singjc singjc commented Jan 23, 2025

Description

Recent versions of Sage output includes the ion_mobility and predicted_mobility columns. I updated the Sage Reader to include these columns in the PSM object and the rescoring features set respectively. I updated the tests as well, I had to update the hash for the idxml test for the sage output, but all tests pass locally.

This should also address this issue ms2rescore/issues/207. When trying to perform rescoring on immunopeptidomics bruker data, it would fail due to the ion_mobility column missing in the PSM object.

- add ion mobility and predicted filed to test_psm obj
- update expected hash in idxml test for outputed sage idxml
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