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42 changes: 42 additions & 0 deletions source/cite/citecyc.bib
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@article{cyclus_v1.6,
title = {Cyclus v1.6.0},
url = {https://figshare.com/articles/code/Cyclus_v1_6_0/25752558/1},
abstract = {Release 1.6.0 of the Cyclus Project:Cyclus is the next-generation agent-based nuclear fuel cycle simulator, providing flexibility to users and developers through a dynamic resource exchange solver and plug-in, user-developed agent framework.The goal of Cyclus is to enable a broad spectrum of fuel cycle simulation while providing a low barrier to entry for new users and agent developers. Cyclus engages with potential module developers and encourages them to join a vibrant community in an expanding ecosystem. Users and developers are always welcome and encouraged to use or contribute to the Cyclus project.},
urldate = {2024-06-21},
author = {Anderson, Aaron and Bachmann, Amanda M. and Bae, Jin Whan and Bhosale, Aditya and Bormann, Lewin and Caldwell-Overdier, Anna and Chandan, Snehal and Chee, Gwendolyn and Flanagan, Robert and Hodge, Ryan and Huff, Kathryn and Kleimenhagen, Kip and Krueger, Dean and McGarry, Meghan and Mouginot, Baptiste and Mummah, Katie and Nibbelink, Ben and Park, Gyutae and Redfoot, Emma and Robert, Yves and Schalz, Max and Scopatz, Anthony and Stomps, Jordan and Wang, Di and Wilson, Paul},
month = may,
year = {2024},
journal = {figshare},
doi = {10.6084/m9.figshare.25752558.v1},
note = {Publisher: figshare},
file = {Snapshot:C\:\\Users\\abachmann\\Zotero\\storage\\RQHBVGUW\\25752558.html:text/html},
}

@article{bcycamore_v1.6,
title = {Cycamore v1.6.0},
url = {https://figshare.com/articles/code/Cycamore_v1_6_0/26107069/1},
abstract = {Release 1.6.0 of CYClus Additional MOdels REpositoryThe Cyclus team has developed a simple standard set of archetypes to support basic fuel cycle modeling situations. In most cases they implement very simple models and are useful for tutorials such as this, and as a standard way to model facilities that may be at the peripheral of a problem.},
urldate = {2024-06-26},
author = {Bachmann, Amanda and Bae, Jin Whan and Caldwell-Overdier, Anna and Chee, Gwendolyn and Fairhurst Agosta, Roberto and Flanagan, Robert and Glen, Adam and Huff, Kathryn and Mouginot, Baptiste and Mummah, Katie and Nibbelink, Ben and Opotowsky, Arrielle and Park, Gyutae and Schalz, Max and Scopatz, Anthony and Stomps, Jordan and Vilmante, Sonata and Wilson, Paul},
month = may,
year = {2024},
journal = {figshare},
doi = {10.6084/m9.figshare.26107069.v1},
note = {Publisher: figshare},
file = {Snapshot:C\:\\Users\\abachmann\\Zotero\\storage\\YB9A9DDX\\26107069.html:text/html},
}

@article{cymetric_v1.6,
title = {Cymetric v1.6.0},
url = {https://figshare.com/articles/code/Cymetric_v1_6_0/26107180/1},
abstract = {Release 1.6.0 of CymetricAdd-on tool for the Cyclus project that assists in analyzing output by computing fuel cycle metrics.},
language = {en},
urldate = {2024-06-28},
journal = {figshare},
author = {Bachmann, Amanda and Caldwell-Overdier, Anna and Chee, Gwendolyn and Flanagan, Robert and Hartono, Luois and Huff, Kathryn and Mouginot, Baptiste and Mummah, Katie and Nibbelink, Ben and Scopatz, Anthony and Stomps, Jordan and Wilson, Paul},
month = may,
year = {2024},
doi = {10.6084/m9.figshare.26107180.v1},
note = {Publisher: figshare},
file = {Snapshot:C\:\\Users\\abachmann\\Zotero\\storage\\V6PL76KS\\26107180.html:text/html},
}
@article{cyclus_v1.5.5,
author = "Anna Caldwell-Overdier and Gwendolyn Chee and Baptiste Mouginot and Jordan Stomps and Paul Wilson",
title = "{Cyclus v1.5.5}",
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8 changes: 5 additions & 3 deletions source/cite/index.rst
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The following are notable publications regarding |cyclus|:

.. bibliography:: pubs.bib
:all:
:list: enumerated
:enumtype: upperroman
:all:
:list: enumerated
:enumtype: upperroman
:style: unsrt

|Cyclus| Presentations
-----------------------
Expand Down Expand Up @@ -47,5 +48,6 @@ Here are entries for citing |cyclus| and Cycamore in your publications:
.. bibliography:: citecyc.bib
:all:
:list: bullet
:style: unsrt

.. _here: citecyc.bib
124 changes: 86 additions & 38 deletions source/cite/pubs.bib
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@article{bachmann_enrichment_2021,
title = {Enrichment dynamics for advanced reactor {HALEU} support},
volume = {7},
copyright = {© A. M. Bachmann et al., Published by EDP Sciences, 2021},
issn = {2491-9292},
url = {https://www.epj-n.org/articles/epjn/abs/2021/01/epjn210024/epjn210024.html},
doi = {10.1051/epjn/2021021},
language = {en},
urldate = {2021-12-02},
journal = {EPJ Nuclear Sciences \& Technologies},
author = {Bachmann, Amanda M. and Fairhurst-Agosta, Roberto and Richter, Zoë and Ryan, Nathan and Munk, Madicken},
year = {2021},
note = {Publisher: EDP Sciences},
pages = {22},
}

@article{bae_standardized_2019,
title = {Standardized verification of the {Cyclus} fuel cycle simulator},
volume = {128},
issn = {0306-4549},
url = {http://www.sciencedirect.com/science/article/pii/S0306454919300179},
doi = {10.1016/j.anucene.2019.01.014},
urldate = {2019-01-25},
journal = {Annals of Nuclear Energy},
author = {Bae, Jin Whan and Peterson-Droogh, Joshua L. and Huff, Kathryn D.},
month = jun,
year = {2019},
keywords = {C, Finite elements, Hydrologic contaminant transport, MOOSE, Multiphysics, Nuclear fuel cycle, Object orientation, Parallel computing, Reactor physics, Simulation, Systems analysis, Verification, agent based modeling, nuclear engineering, repository},
pages = {288--291},
}

@article{huff_fundamental_2016,
title = {Fundamental concepts in the {Cyclus} nuclear fuel cycle simulation framework},
volume = {94},
issn = {0965-9978},
url = {http://www.sciencedirect.com/science/article/pii/S0965997816300229},
doi = {10.1016/j.advengsoft.2016.01.014},
language = {en},
urldate = {2016-02-12},
journal = {Advances in Engineering Software},
author = {Huff, Kathryn D. and Gidden, Matthew J. and Carlsen, Robert W. and Flanagan, Robert R. and McGarry, Meghan B. and Opotowsky, Arrielle C. and Schneider, Erich A. and Scopatz, Anthony M. and Wilson, Paul P. H.},
month = apr,
year = {2016},
note = {arXiv: 1509.03604},
keywords = {Agent based modeling, Computer Science - Computational Engineering, Computer Science - Computational Engineering, Finance, and Science, Computer Science - Mathematical Software, Computer Science - Multiagent Systems, Computer Science - Software Engineering, D.2.13, D.2.4, Finance, I.6.7, I.6.8, Nuclear engineering, Nuclear fuel cycle, Object orientation, Simulation, Systems analysis, agent based modeling, and Science, nuclear engineering, simulation},
pages = {46--59},
}

@inproceedings{li_2015,
address = {San Juan, Puerto Rico},
title = {{Visualizing scientific data for lay audiences:
Expand All @@ -22,6 +70,28 @@ @inproceedings{gidden_agent-based_2014
keywords = {submitted}
},
@inproceedings{carlsen_deployment_2014,
address = {Anaheim, {CA}},
title = {Deployment Optimization with the {C}yclus Fuel Cycle Simulator},
booktitle = {Proceedings of the 2014 {ANS} Winter Conference},
author = {Carlsen, Robert, and Gidden, Matthew, and Wilson Paul},
volume = {111},
pages = {241--244},
month = {Nov},
year = {2014}
}

@inproceedings{huff_extensions_2014,
address = {Anaheim, {CA}},
title = {Extensions to the CYCLUS Ecosystem in Support of Market-Driven Transition Capability},
booktitle = {Proceedings of the 2014 {ANS} Winter Conference},
author = {Huff, Kathryn D. and Fratoni, Massimiliano and Greenberg, Harris R.},
volume = {111},
pages = {245--248},
month = {Nov},
year = {2014}
}

@inproceedings{scopz_2014,
address = {Salt Lake City, {UT}},
title = {A Dynamic, Dependent Type System for Nuclear Fuel Cycle Code
Expand All @@ -40,15 +110,6 @@ @inproceedings{gidden_agent-based_2013
year = {2013}
},
@inproceedings{huff_open_2011,
title = {Open Architecture and Modular Paradigm of {C}yclus, a Fuel Cycle Simulation Code},
volume = {104},
booktitle = {Transactions of the American Nuclear Society},
author = {Huff, Kathryn and Wilson, Paul and Gidden, Matthew},
year = {2011},
pages = {183}
},
@inproceedings{huff_cyclus_2013,
address = {Salt Lake City, {UT}, United States},
title = {{C}yclus Fuel Cycle Simulation Capabilities with the {C}yder
Expand All @@ -59,16 +120,6 @@ @inproceedings{huff_cyclus_2013
year = {2013}
},
@inproceedings{gidden_once-through_2012,
address = {San Diego, {CA}},
title = {Once-Through Benchmarks with {C}yclus, a Modular, Open-Source Fuel Cycle Simulator},
booktitle = {Proceedings of the 2012 {ANS} Winter Conference},
author = {Gidden, Matthew and Wilson, Paul and Huff, Kathryn and
Carlsen, Robert},
month = {Nov},
year = {2012}
},
@inproceedings{gidden_developing_2013,
address = {Atlanta, {GA}, United States},
title = {Developing Standardized, Open Benchmarks and a Corresponding Specification Language for the Simulation of Dynamic Fuel Cycles},
Expand All @@ -89,24 +140,21 @@ @phdthesis{huff_integrated_2013
keywords = {Geological engineering, Cyclus, Kathryn D., Nuclear Engineering, Nuclear Physics An Integrated Used Fuel Disposition and Generic Repository Model for Fuel Cycle Analysis {THE} {UNIVERSITY} {OF} {WISCONSIN} - {MADISON} Paul {P.H.} Wilson Huff}
}

@inproceedings{carlsen_deployment_2014,
address = {Anaheim, {CA}},
title = {Deployment Optimization with the {C}yclus Fuel Cycle Simulator},
booktitle = {Proceedings of the 2014 {ANS} Winter Conference},
author = {Carlsen, Robert, and Gidden, Matthew, and Wilson Paul},
volume = {111},
pages = {241--244},
@inproceedings{gidden_once-through_2012,
address = {San Diego, {CA}},
title = {Once-Through Benchmarks with {C}yclus, a Modular, Open-Source Fuel Cycle Simulator},
booktitle = {Proceedings of the 2012 {ANS} Winter Conference},
author = {Gidden, Matthew and Wilson, Paul and Huff, Kathryn and
Carlsen, Robert},
month = {Nov},
year = {2014}
}
year = {2012}
},
@inproceedings{huff_extensions_2014,
address = {Anaheim, {CA}},
title = {Extensions to the CYCLUS Ecosystem in Support of Market-Driven Transition Capability},
booktitle = {Proceedings of the 2014 {ANS} Winter Conference},
author = {Huff, Kathryn D. and Fratoni, Massimiliano and Greenberg, Harris R.},
volume = {111},
pages = {245--248},
month = {Nov},
year = {2014}
}
@inproceedings{huff_open_2011,
title = {Open Architecture and Modular Paradigm of {C}yclus, a Fuel Cycle Simulation Code},
volume = {104},
booktitle = {Transactions of the American Nuclear Society},
author = {Huff, Kathryn and Wilson, Paul and Gidden, Matthew},
year = {2011},
pages = {183}
},

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