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  1. ref-guided-assembly-pipeline ref-guided-assembly-pipeline Public

    Adapting the pipeline described in Lischer & Schmizu (2017, doi:10.1186/s12859-017-1911-6) for my own use.

    Shell 3 3

  2. fastq2biom fastq2biom Public archive

    Z shell script automating steps processing Illumina paired-end FASTQ to a BIOM format.

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  3. cyklee.github.io cyklee.github.io Public

    Jekyll-powered user page

    HTML

  4. Huntaxa Huntaxa Public archive

    Search for specified taxa above a specified relative abundance among microbiome studies

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  5. microbiome_helper microbiome_helper Public

    Forked from LangilleLab/microbiome_helper

    A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.

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  6. datasharing datasharing Public

    Forked from jtleek/datasharing

    The Leek group guide to data sharing