Code

docs: New documentation#858

Code

Merged

drodarie merged 76 commits intomaindbbs-lab/bsb-core:mainfrom New_docsdbbs-lab/bsb-core:New_docsCopy head branch name to clipboardJan 7, 2025

+9,021-2,354

Commits

Commits on Feb 28, 2024

• Renew placement documentation

  filimarc

  committed
  1a8b541

  Copy full SHA for 1a8b541

• Renew Connectivity docs

  filimarc

  committed
  c95f4b1

  Copy full SHA for c95f4b1

Commits on Mar 1, 2024

• Renew region and partition doc

  filimarc

  committed
  63f1e8c

  Copy full SHA for 63f1e8c

Commits on Mar 11, 2024

• Merge branch 'main' into New_docs

  filimarc

  committed
  8c580b6

  Copy full SHA for 8c580b6

Commits on Apr 11, 2024

• Merge remote-tracking branch 'origin/main' into New_docs

  filimarc

  committed
  dd172c1

  Copy full SHA for dd172c1

• Fix deprecated setup-python@v1

  filimarc

  committed
  8921ac5

  Copy full SHA for 8921ac5

Commits on Jun 26, 2024

• Merge branch 'main' into New_docs

  filimarc

  authored
  d70c538

  Copy full SHA for d70c538

Commits on Jul 2, 2024

• Remove outdated strategies

  filimarc

  committed
  4cec130

  Copy full SHA for 4cec130

Commits on Jul 15, 2024

• Merge branch 'main' into New_docs

  filimarc

  authored
  f7a425c

  Copy full SHA for f7a425c

Commits on Jul 31, 2024

• Merge branch 'main' into New_docs

  filimarc

  authored
  846934e

  Copy full SHA for 846934e

Commits on Aug 6, 2024

• docs: Update connectivity documentation

  filimarc

  committed
  592c20b

  Copy full SHA for 592c20b

• docs: Improve english

  filimarc

  committed
  adca741

  Copy full SHA for adca741

Commits on Aug 9, 2024

• docs: fix doc refs and initialisms

  

  filimarc

  committed
  fc662cf

  Copy full SHA for fc662cf

Commits on Aug 28, 2024

• docs: update placement documentation

  

  filimarc

  committed
  95c80ec

  Copy full SHA for 95c80ec

Commits on Aug 30, 2024

• docs: add note for packing error

  

  filimarc

  committed
  01136c8

  Copy full SHA for 01136c8

Commits on Sep 6, 2024

• docs: update cell types documentation

  filimarc

  committed
  f77e952

  Copy full SHA for f77e952

• docs: small updates to partition

  filimarc

  committed
  5cdc0d4

  Copy full SHA for 5cdc0d4

Commits on Sep 13, 2024

• docs: Add getting started for Simulations

  filimarc

  committed
  73896b9

  Copy full SHA for 73896b9

Commits on Sep 16, 2024

• docs: Update Simulation intro page

  

  filimarc

  committed
  168d0c5

  Copy full SHA for 168d0c5

• docs: update simulation

  

  filimarc

  committed
  c9a7170

  Copy full SHA for c9a7170

Commits on Sep 17, 2024

• docs: update nest simulation page

  filimarc

  committed
  572badb

  Copy full SHA for 572badb

Commits on Sep 27, 2024

• docs: fix nest simulation docs

  filimarc

  committed
  174eb58

  Copy full SHA for 174eb58

Commits on Oct 9, 2024

• docs: fix configuration usage in gs | remove refs to bsb-plotting

  filimarc

  committed
  45d989b

  Copy full SHA for 45d989b

• docs: reshape welcome page and toctrees

  filimarc

  committed
  fd26887

  Copy full SHA for fd26887

• docs: fix refs in regions doc

  filimarc

  committed
  4363c78

  Copy full SHA for 4363c78

• fix: bsb commands related to config creation from template.

  drodarie

  committed
  9c98b16

  Copy full SHA for 9c98b16

• fix: bsb simulate command output option. Now is used to specify the output folder.

  drodarie

  committed
  b4844c0

  Copy full SHA for b4844c0

Commits on Oct 10, 2024

• docs: update analyze page in gs

  filimarc

  committed
  c7c0dca

  Copy full SHA for c7c0dca

• docs: add json recap for simulation gs

  filimarc

  committed
  a049938

  Copy full SHA for a049938

Commits on Oct 11, 2024

• docs: update top-level guide

  filimarc

  committed
  8e63d49

  Copy full SHA for 8e63d49

Commits on Oct 14, 2024

• chore: merge branch main on branch New_docs

  drodarie

  committed
  0e548fd

  Copy full SHA for 0e548fd

• docs: improve wording in installation and top level guide.

  drodarie

  committed
  7fbe8f4

  Copy full SHA for 7fbe8f4

Commits on Oct 15, 2024

• docs: improve getting-started_reconstruction.rst.

  Show description for 9b89272
  drodarie

  committed
  9b89272

  Copy full SHA for 9b89272

Commits on Oct 17, 2024

• docs: Refactor documentations

  Show description for c783f88
  drodarie

  committed
  c783f88

  Copy full SHA for c783f88

Commits on Oct 18, 2024

• docs: update README

  filimarc

  committed
  28d0c8b

  Copy full SHA for 28d0c8b

• docs: update GS config templates and line refs

  filimarc

  committed
  a2f1a97

  Copy full SHA for a2f1a97

• docs: Fix installations tabs.

  Show description for 63d91c5
  drodarie

  committed
  63d91c5

  Copy full SHA for 63d91c5

Commits on Oct 21, 2024

• docs: add targetting doc in simulation page

  filimarc

  committed
  7f3b201

  Copy full SHA for 7f3b201

• docs: fix targetting section

  filimarc

  committed
  5b6a88f

  Copy full SHA for 5b6a88f

Commits on Oct 22, 2024

• docs: remove neuromorfo uri scheme ref in gs

  filimarc

  committed
  734c1b2

  Copy full SHA for 734c1b2

• chore: Merge branch 'New_docs' of github.com:dbbs-lab/bsb-core into New_docs

  filimarc

  committed
  2ccfb95

  Copy full SHA for 2ccfb95

Commits on Oct 28, 2024

• docs: Rewrite simulation. Update workflow figure.

  drodarie

  committed
  f9c6bc4

  Copy full SHA for f9c6bc4

Commits on Oct 29, 2024

• docs: Update simulation tutorial.

  Show description for 4c36d3f
  drodarie

  committed
  4c36d3f

  Copy full SHA for 4c36d3f

Commits on Oct 30, 2024

• docs: update placement set

  filimarc

  committed
  0b62f84

  Copy full SHA for 0b62f84

• docs: add connectivity-set page

  filimarc

  committed
  25f5c8d

  Copy full SHA for 25f5c8d

• docs: Merge examples for accessing storage data.

  Show description for b81f3a2
  drodarie

  committed
  b81f3a2

  Copy full SHA for b81f3a2

Commits on Oct 31, 2024

• docs: Rewrite analyse_spike_results, reorganize configuration section.

  drodarie

  committed
  6e5e02c

  Copy full SHA for 6e5e02c

• docs: Add example to display morphologies, rewrite project tutorial

  drodarie

  committed
  0eabf30

  Copy full SHA for 0eabf30

Commits on Nov 1, 2024

• docs: update tutorials

  filimarc

  committed
  7c58b33

  Copy full SHA for 7c58b33

Commits on Nov 5, 2024

• docs: Minor fixes to tutorial on python projects section

  drodarie

  committed
  19ff167

  Copy full SHA for 19ff167

• docs: Add documentation to ConnectionStrategy

  Show description for b871a37
  drodarie

  committed
  b871a37

  Copy full SHA for b871a37

• docs: Add tutorial on writing components separated from components.rst

  drodarie

  committed
  b2a7f60

  Copy full SHA for b2a7f60

Commits on Nov 6, 2024

• docs: First draft of the tutorial for writing placement strategy

  Show description for ada450a
  drodarie

  committed
  ada450a

  Copy full SHA for ada450a

• docs: Fix tutorial placement strategy

  Show description for 7292807
  drodarie

  committed
  7292807

  Copy full SHA for 7292807

Commits on Nov 7, 2024

• docs: Fix some typos and config for nest simulation tutorial.

  drodarie

  committed
  047f1f5

  Copy full SHA for 047f1f5

• docs: separate neuron and nest tutorials.

  Show description for 3044916
  drodarie

  committed
  3044916

  Copy full SHA for 3044916

• docs: simplify the placement class for the tutorial

  drodarie

  committed
  2438b79

  Copy full SHA for 2438b79

• docs: add missing nest config

  drodarie

  committed
  1920d9c

  Copy full SHA for 1920d9c

Commits on Nov 8, 2024

• docs: add tutorial-template files for NEURON sim | update gs

  filimarc

  committed
  157401e

  Copy full SHA for 157401e

Commits on Nov 11, 2024

• docs: Update neuron simulation guide

  filimarc

  committed
  f54ffa3

  Copy full SHA for f54ffa3

Commits on Nov 14, 2024

• docs: Add section for analyze neuron results | update neuron parts of gs

  filimarc

  committed
  3b547b2

  Copy full SHA for 3b547b2

Commits on Nov 19, 2024

• docs: WIP on guide for neuron simulation

  Show description for 4986e73
  drodarie

  committed
  4986e73

  Copy full SHA for 4986e73

Commits on Nov 22, 2024

• docs: fix naming in neuron gs

  filimarc

  committed
  0919db7

  Copy full SHA for 0919db7

• docs: fix ref number in neuron gs

  filimarc

  committed
  b42a978

  Copy full SHA for b42a978

• docs: add section for simulation results

  filimarc

  committed
  edc7a43

  Copy full SHA for edc7a43

• docs: fix guide neurons json indent and lines

  drodarie

  committed
  45752c6

  Copy full SHA for 45752c6

• docs: Add explanation on distribution placement.

  Show description for 78be5e7
  drodarie

  committed
  78be5e7

  Copy full SHA for 78be5e7

Commits on Nov 24, 2024

• docs: Rework guides for simulations

  Show description for 11da986
  drodarie

  committed
  11da986

  Copy full SHA for 11da986

Commits on Nov 26, 2024

• docs: simplify writing components tutorial by splitting connection and placement

  drodarie

  committed
  8e4001d

  Copy full SHA for 8e4001d

• docs: Add FAQ for BSB-MUSIC related issue

  Show description for 1961dc4
  drodarie

  committed
  1961dc4

  Copy full SHA for 1961dc4

Commits on Dec 6, 2024

• docs: fix strategy in yaml gs

  filimarc

  committed
  5d8ec80

  Copy full SHA for 5d8ec80

Commits on Dec 8, 2024

• docs: Add figures and rewrite scaffold page.

  drodarie

  committed
  90fbd3f

  Copy full SHA for 90fbd3f

• docs: Improve documentation on parallelization + minor fixes

  drodarie

  committed
  43991f2

  Copy full SHA for 43991f2

Commits on Dec 28, 2024

• test: add tests for bsb new

  Show description for 17e27eb
  drodarie

  committed
  17e27eb

  Copy full SHA for 17e27eb

• fix: add bsb-json dependencies for bsb project tests

  drodarie

  committed
  d51b0ac

  Copy full SHA for d51b0ac

Commits on Jan 7, 2025

• Merge branch 'main' into New_docs

  drodarie

  authored
  07e30cc

  Copy full SHA for 07e30cc