cn2threejs - Cadnano 3D coordinate exporter

cn2threejs reads in a cadnano json file and writes a coordinate json file.

Installation (virtualenv)

mkvirtualenv myvenv
pip3 install PyQt5 pandas termcolor git+https://github.com/douglaslab/cadnano2.5

Installation (future, doesn't work yet)

pip3 install cn2threejs

Example Usage

cn2threejs -i cadnanofile.json -o outputdir

This should output two files: cadnanofile_coords.json and viewer/input.json. The second file is read as input by viewer/index.html.

Dependencies

• cadnano2.5

Citing

If you publish research using cn2threejs, please cite placeholder.