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v2.0.0 - Performance improvements

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@sreichl sreichl released this 30 Jun 13:54
· 11 commits to main since this release

Enhancements and new features

  • PCA: To improve performance n_components and svd_solver can be configured.
  • Heatmap: performance improvements
    • distance matrix calculation done by pdist from scipy and parallelized for observations and features
    • hierarchical clustering using fastcluster
    • observations can be downsampled using configuration n_observations
    • top features can be selected by variability using configuration n_features

The documentation was updated accordingly.

Bug fixes and other performance improvements are not mentioned.

Full Changelog: v1.1.0...v2.0.0