Skip to content

0.3.7 (2024-01-10)
Compare
Choose a tag to compare
@github-actions github-actions released this 10 Jan 15:14
· 93 commits to main since this release
v0.3.7
9cdce73

Release Notes

Chore

  • add trace to ml mm parser
  • update.
  • update.
  • update.
  • update.
  • update.
  • update.
  • update.
  • update.

New Features

  • FIRE extract update
  • FIRE extract update
  • Adding a fire bed+ extract for the fire pipeline.
  • FIRE now works in fibertools! TODO add info to extract, etc.
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • adding rle information to fire feats
  • update fire model
  • use threads better, fire feats
  • use threads better, fire feats
  • use threads better, fire feats
  • use threads better, fire feats
  • start working on decorators
  • start working on decorators
  • FIRE io
  • Speed up writing FIRE results
  • add a min ML options to add-nucs and keep working on FIRE predictions
  • fire progress indicator.
  • Add ability to print FIRE features to a text file, TODO predict FIREs in rust.
  • Move prediction into a feature only avalible through Cargo, since bioocnda wont let me do large installs anymore.
  • add simplify options to center
  • add hp tag to center
  • add hp tag to center

Bug Fixes

  • allow for the unaligned read start and read end
  • allow for the unaligned read start and read end
  • make an iterator for fiberseq records
  • try and better use threads.
  • try and better use threads.

Other

  • adding code outline for footprinting tool
  • cli
  • clippy

Commit Statistics

  • 72 commits contributed to the release over the course of 81 calendar days.
  • 93 days passed between releases.
  • 56 commits were understood as conventional.
  • 0 issues like '(#ID)' were seen in commit messages

Commit Details

view details
  • Uncategorized
    • Clippy (1f27489)
    • Release fibertools-rs v0.3.6 (2f4a9ce)
    • Clippy (ca10f3e)
    • Paths (78e9b44)
    • Release fibertools-rs v0.3.6 (cf6891e)
    • FIRE extract update (7ddcf19)
    • FIRE extract update (bfed259)
    • Adding code outline for footprinting tool (c733189)
    • Typo in wget (a7f24d8)
    • Update CI (6e3bf75)
    • Add skip no m6a opts (a98c064)
    • Clippy (026862a)
    • Speed up extracting decorators, and move make decorators a struct (7176aa4)
    • Adding a fire bed+ extract for the fire pipeline. (cebf54c)
    • FIRE now works in fibertools! TODO add info to extract, etc. (8db7b41)
    • Adding rle information to fire feats (3edee57)
    • Adding rle information to fire feats (b10a8c4)
    • Adding rle information to fire feats (c459196)
    • Adding rle information to fire feats (3a96904)
    • Adding rle information to fire feats (babb017)
    • Adding rle information to fire feats (f830405)
    • Adding rle information to fire feats (b954aab)
    • Adding rle information to fire feats (fd11b45)
    • Adding rle information to fire feats (7c7c2c3)
    • Adding rle information to fire feats (e1f9897)
    • Adding rle information to fire feats (7fac8c7)
    • Adding rle information to fire feats (be21ec1)
    • Adding rle information to fire feats (20985ab)
    • Adding rle information to fire feats (0166d77)
    • Adding rle information to fire feats (53ee8b4)
    • Adding rle information to fire feats (6ab4844)
    • Adding rle information to fire feats (e4510e0)
    • Adding rle information to fire feats (ee27328)
    • Adding rle information to fire feats (efb4372)
    • Cli (09249cb)
    • Clippy (3cf7a30)
    • Update fire model (a7b9883)
    • Use threads better, fire feats (de02c26)
    • Use threads better, fire feats (9ac73b7)
    • Use threads better, fire feats (6d00af8)
    • Use threads better, fire feats (fe23936)
    • Clean and move to FIRE (dea26a5)
    • Clean and move to FIRE (34b2c8f)
    • Clean and move to FIRE (1b3eccf)
    • Clean and move to FIRE (77a90bb)
    • Start working on decorators (1671411)
    • Start working on decorators (1443446)
    • Add trace to ml mm parser (85b6a71)
    • FIRE io (9839e24)
    • Speed up writing FIRE results (51149cb)
    • Add a min ML options to add-nucs and keep working on FIRE predictions (bcca38f)
    • Allow for the unaligned read start and read end (d50f338)
    • Allow for the unaligned read start and read end (51ea0b9)
    • Make an iterator for fiberseq records (3a7134c)
    • Typo (f3af8c6)
    • Try and better use threads. (7ba5d14)
    • Try and better use threads. (43cc3dc)
    • Fire progress indicator. (1814ee4)
    • Add ability to print FIRE features to a text file, TODO predict FIREs in rust. (77f60b9)
    • Move prediction into a feature only avalible through Cargo, since bioocnda wont let me do large installs anymore. (564cc96)
    • Add simplify options to center (6855072)
    • Add hp tag to center (c4d0c93)
    • Add hp tag to center (eb5c54e)
    • Start thinking about geting fire features (f163c02)
    • Update. (7b1e933)
    • Update. (76326aa)
    • Update. (1e08da2)
    • Update. (e6e45a3)
    • Update. (cd18945)
    • Update. (d33aed7)
    • Update. (df41637)
    • Update. (ff5759e)
Assets 5
Loading