Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Updated workflow for basic UMI-aware alignment and qc #840

Open
wants to merge 1 commit into
base: master
Choose a base branch
from
Open

Updated workflow for basic UMI-aware alignment and qc #840

wants to merge 1 commit into from

Conversation

jasonwalker80
Copy link
Member

first pass at saving all BAMs/CRAMs that might be needed

@jasonwalker80 jasonwalker80 changed the title Updated UMI workflow for basic UMI-aware alignment and qc Updated workflow for basic UMI-aware alignment and qc Dec 9, 2019
@chrisamiller
Copy link
Collaborator

Suggestion to add some "doc:" lines that explain the difference between the output crams

tmooney
tmooney reviewed Dec 10, 2019
View reviewed changes
Copy link
Member

@tmooney tmooney left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

This generally makes sense to me. I agree that it'd be good to document what the differences between the three outputs are.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Reviewers

@tmooney tmooney tmooney left review comments

At least 1 approving review is required to merge this pull request.

Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

Successfully merging this pull request may close these issues.
3 participants
@jasonwalker80 @chrisamiller @tmooney