Native Installation

1. Install GLUE Software Framework If you haven't installed GLUE yet, follow the native installation instructions in the GLUE User Guide.

2. Download the HMPV-GLUE Repository Clone or download the HMPV-GLUE repository.

3. Load the Prebuilt Database A prebuilt version of the HMPV-GLUE database is available in the repository, so you don’t need to build it locally. To load this database into your local MySQL system, use the following commands, adjusting to match your MySQL installation:

   /usr/local/mysql/bin/mysql  --user=gluetools --password=glue12345 GLUE_TOOLS < hmpv_glue.sql

Once you have done this, start the GLUE command line interpreter and check to see if the project is there.

Mode path: /
GLUE> list project 
+==============+====================================================+
|     name     |                    description                     |
+==============+====================================================+
| aav          | A GLUE project for human metapneumovirus           |
+==============+====================================================+
Projects found: 1

Alternatively, if you prefer to build the project locally from scratch, follow these steps:

1. Navigate to the HMPV-GLUE Directory

2. Start the GLUE Command-Line Interpreter

3. Build the Core Project To build the core project run the following command:

   Mode path: /
   GLUE> run file buildCoreProject.glue

4. Build the Extension Project To add all GenBank nuccore sequences run the following command:

   Mode path: /
   GLUE> run file buildNuccoreExt.glue

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