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@gimelbrantlab

Gimelbrant Lab

Gene regulation and epigenomics, allele-specific analysis

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  1. controlFreq controlFreq Public

    The elaborate method for quantification of allele-specific expression.

    R 2

  2. fastq2allelictabs fastq2allelictabs Public

    Python 2

  3. Qllelic Qllelic Public

    Enabling differential allele-specific analysis

    R 11 2

  4. ASEReadCounter_star ASEReadCounter_star Public

    Preprocessing sequencing data for allele-specific analysis

    Python 11 5

Repositories

Showing 10 of 11 repositories
  • fastq2allelictabs Public
    gimelbrantlab/fastq2allelictabs’s past year of commit activity
    Python 2 0 0 0 Updated Mar 11, 2024
  • MAE Public

    Working repository for MAE project.

    gimelbrantlab/MAE’s past year of commit activity
    0 MIT 0 0 0 Updated Apr 6, 2023
  • controlFreq Public

    The elaborate method for quantification of allele-specific expression.

    gimelbrantlab/controlFreq’s past year of commit activity
    R 2 0 0 0 Updated Jan 31, 2023
  • Alelle-Specific-Analysis-Knowledge-Base Public
    gimelbrantlab/Alelle-Specific-Analysis-Knowledge-Base’s past year of commit activity
    0 0 0 0 Updated Jul 11, 2022
  • Qllelic Public

    Enabling differential allele-specific analysis

    gimelbrantlab/Qllelic’s past year of commit activity
    R 11 GPL-3.0 2 6 0 Updated Feb 3, 2022
  • drug-screen-seq Public

    Arrayed screening by RNA sequencing

    gimelbrantlab/drug-screen-seq’s past year of commit activity
    Perl 1 0 0 0 Updated Nov 15, 2021
  • ASEReadCounter_star Public

    Preprocessing sequencing data for allele-specific analysis

    gimelbrantlab/ASEReadCounter_star’s past year of commit activity
    Python 11 GPL-3.0 5 8 0 Updated May 27, 2021
  • QCumber Public

    Replaced by Qllelic (Enabling differential allele-specific analysis)

    gimelbrantlab/QCumber’s past year of commit activity
    R 1 GPL-3.0 0 0 0 Updated Feb 25, 2020
  • ASE Public

    early version of (Pipeline for detection of differential allelic imbalance from RNA-seq)

    gimelbrantlab/ASE’s past year of commit activity
    HTML 6 MIT 5 0 1 Updated Feb 25, 2020
  • gimelbrantlab.github.io Public
    gimelbrantlab/gimelbrantlab.github.io’s past year of commit activity
    HTML 0 0 0 0 Updated Jan 27, 2020
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