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Add a tifffile tile source. #885

Merged
merged 1 commit into from
Jul 7, 2022
Merged

Add a tifffile tile source. #885

merged 1 commit into from
Jul 7, 2022

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manthey
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@manthey manthey commented Jul 7, 2022

This better supports Leica SCN files than either the openslide or tiff sources.

TODO:

  • When there is no S and C <= 3, should we auto-composite channels? We have appropriate data in self._channelInfo.

  • Currently, series and pages that aren't used for the image and are larger than a specified size aren't exposed in any manner (i.e., not as associated images). Should we expose them in a reduced resolution version? Or list those that aren't exposed in the internal metadata?

This better supports Leica SCN files than either the openslide or tiff
sources.

TODO:

- When there is no S and C <= 3, should we auto-composite channels?  We
  have appropriate data in self._channelInfo.

- Currently, series and pages that aren't used for the image and are
  larger than a specified size aren't exposed in any manner (i.e., not
  as associated images).  Should we expose them in a reduced resolution
  version?  Or list those that aren't exposed in the internal metadata?
@manthey manthey merged commit e7531fb into master Jul 7, 2022
@manthey manthey deleted the tifffile-source branch July 7, 2022 19:57
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