Only report the top-level unaligned classes.

As per request (see INCATools/ontology-development-kit#1175), when producing a report, it should only list the *top-level* unaligned classes, not their descendants.
gouttegd · Feb 5, 2025 · 50919b3 · 50919b3
1 parent 37460fe
commit 50919b3
Showing 1 changed file with 5 additions and 2 deletions.
diff --git a/src/main/java/org/incenp/obofoundry/robot/ValidateCommand.java b/src/main/java/org/incenp/obofoundry/robot/ValidateCommand.java
@@ -114,7 +114,10 @@ public void performOperation(CommandState state, CommandLine line) throws Except
                     }
                 }
                 if ( !aligned ) {
-                    unalignedClasses.add(klass);
+                    // Report only top-level classes (whose only parent is owl:Thing)
+                    if ( ancestors.size() == 1 ) {
+                        unalignedClasses.add(klass);
+                    }
                 }
             }
         }
@@ -134,7 +137,7 @@ public void performOperation(CommandState state, CommandLine line) throws Except
         }
 
         if ( !unalignedClasses.isEmpty() ) {
-            logger.error("Ontology contains {} unaligned class(es)", unalignedClasses.size());
+            logger.error("Ontology contains {} top-level unaligned class(es)", unalignedClasses.size());
             System.exit(1);
         }
     }