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Update README.md
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grst authored Jun 11, 2021
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Expand Up @@ -30,15 +30,18 @@ The conda environment gets mounted into the container - like that there's no nee

```bash
git clone [email protected]:grst/rstudio-server-conda.git
cd rstudio-server-conda/singularity
```

2. Activate the target conda env or set the environment variable `CONDA_PREFIX`
to point to the location of the conda env.

3. Check the `run_singularity.sh` script. In particular, you may need to add additional bind mounts
(e.g. a global data directory).

3. Execute the `run_singularity.sh` script. It will automatically build the container if it is not available.

```bash
cd rstudio-server-conda/singularity
```bash
PORT=8787 PASSWORD=notsafe ./run_singularity.sh
```

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