Introducción a clusterProfiler

Viernes de Bioinformática

Instituto Nacional de Medicina Genómica

Hugo Tovar [email protected]

Genómica Computacional

Este material:

https://github.com/hachepunto/VBI_clusterProfiler

clusterProfiler in Bioconductor

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("clusterProfiler")

For older versions of R, please refer to the appropriate Bioconductor release.

Citation (from within R, enter citation("clusterProfiler")):

Wu T, Hu E, Xu S, Chen M, Guo P, Dai Z, Feng T, Zhou L, Tang W, Zhan L, Fu x, Liu S, Bo X, Yu G (2021). “clusterProfiler 4.0: A universal enrichment tool for interpreting omics data.” The Innovation, 2(3), 100141. doi:10.1016/j.xinn.2021.100141.

Yu G, Wang L, Han Y, He Q (2012). “clusterProfiler: an R package for comparing biological themes among gene clusters.” OMICS: A Journal of Integrative Biology, 16(5), 284-287. doi:10.1089/omi.2011.0118.