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Post-processing-FIJI-directionality-analysis

This is to document the python codes for post processing of saved histogram data by FIJI directionality analysis.

The current postprocessing functions include:

  1. Build the 3D direction distribution based on the 2D direction distribution on individual slices
  2. Normalise the 3D direction distribution by setting the maximum intensity as 1
  3. Linearly scale the 3D direction distribution by setting the maximum intensity as 1 and the minimum intensity as 0
  4. Create a pseudo dataset based on the a histogram data
  5. Create customised box plots for comparison

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