Update CI integration with NERSC #332
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name: h5bench (HDF5 develop) | |
on: | |
pull_request: | |
workflow_dispatch: | |
jobs: | |
h5bench: | |
runs-on: ubuntu-latest | |
timeout-minutes: 60 | |
env: | |
OMPI_ALLOW_RUN_AS_ROOT: 1 | |
OMPI_ALLOW_RUN_AS_ROOT_CONFIRM: 1 | |
OMPI_MCA_rmaps_base_oversubscribe: "yes" | |
steps: | |
- uses: actions/checkout@v2 | |
with: | |
submodules: true | |
- name: Dependencies | |
run: | | |
sudo apt-get update | |
sudo apt-get install cmake gcc gdb libtool zlib1g-dev python3 libopenmpi-dev -y | |
# HDF5 | |
git clone https://github.com/HDFGroup/hdf5.git | |
# VOL-ASYNC | |
git clone --recursive https://github.com/hpc-io/vol-async.git --branch v1.7 /opt/vol-async | |
- name: Build HDF5 develop | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export HDF5_LIBTOOL=/usr/bin/libtoolize | |
mkdir $HDF5_DIR | |
cd hdf5 | |
./autogen.sh | |
./configure --prefix=$HDF5_DIR --enable-parallel --enable-threadsafe --enable-unsupported | |
make -j 2 | |
make install | |
- name: Build Argobots | |
run: | | |
export ABT_DIR=/opt/argobots | |
cd /opt/vol-async/argobots | |
./autogen.sh | |
./configure --prefix=$ABT_DIR | |
make -j 2 | |
make install | |
- name: Build VOL-ASYNC | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
cd $ASYNC_DIR | |
mkdir build | |
cd build | |
cmake .. -DCMAKE_INSTALL_PREFIX=$ASYNC_DIR -DCMAKE_PREFIX_PATH=$HDF5_DIR -DENABLE_WRITE_MEMCPY=ON | |
make | |
make install | |
- name: Test VOL-ASYNC | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export HDF5_HOME=$HDF5_DIR | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_DIR/lib:$HDF5_DIR/lib:$ABT_DIR/lib:$LD_LIBRARY_PATH | |
export HDF5_PLUGIN_PATH="$ASYNC_DIR/lib" | |
export HDF5_VOL_CONNECTOR="async under_vol=0;under_info={}" | |
cd $ASYNC_DIR/build | |
export LD_PRELOAD=$ASYNC_DIR/lib/libh5async.so:$ABT_DIR/lib/libabt.so:$HDF5_DIR/lib/libhdf5.so | |
ctest | |
- name: Build h5bench SYNC | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export HDF5_HOME=$HDF5_DIR | |
export LD_LIBRARY_PATH=$HDF5_HOME/lib:$LD_LIBRARY_PATH | |
mkdir build-sync | |
cd build-sync | |
cmake .. \ | |
-DH5BENCH_ALL=ON | |
make -j 2 | |
sudo make install | |
sudo ldconfig | |
- name: Build h5bench ASYNC | |
run: | | |
current="$PWD" | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
mkdir build-async | |
cd build-async | |
cmake .. \ | |
-DWITH_ASYNC_VOL:BOOL=ON \ | |
-DCMAKE_C_FLAGS="-I$ASYNC_HOME/include -L$ASYNC_HOME/lib" \ | |
-DH5BENCH_ALL=ON | |
make -j 2 | |
sudo make install | |
sudo ldconfig | |
- name: Test h5bench SYNC write/read | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-read-contig-1d-small.json | |
- name: Test h5bench ASYNC write/read | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-read-contig-1d-small.json | |
./h5bench --debug --abort-on-failure ../samples/async-write-read-contig-1d-small.json | |
- name: Setup tmate session | |
if: ${{ failure() }} | |
uses: mxschmitt/action-tmate@v3 | |
- name: Test h5bench SYNC write 1D contiguous (memory) strided (file) | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-strided.json | |
- name: Test h5bench SYNC write 1D contiguous (memory) contiguous (file) | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-contig.json | |
- name: Test h5bench SYNC write 1D contiguous (memory) interleaved (file) | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-interleaved.json | |
- name: Test h5bench SYNC write 1D interleaved (memory) contiguous (file) | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-interleaved-contig.json | |
- name: Test h5bench SYNC write 1D interleaved (memory) interleaved (file) | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-interleaved-interleaved.json | |
- name: Test h5bench SYNC write 2D contiguous (memory) contiguous (file) | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-contig-contig.json | |
- name: Test h5bench SYNC write 2D contiguous (memory) interleaved (file) | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-contig-interleaved.json | |
- name: Test h5bench SYNC write 2D interleaved (memory) contiguous (file) | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-interleaved-contig.json | |
- name: Test h5bench SYNC write 2D interleaved (memory) interleaved (file) | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-interleaved-interleaved.json | |
- name: Test h5bench SYNC write 3D contiguous (memory) contiguous (file) | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-3d-contig-contig.json | |
- name: Test h5bench SYNC read 1D contiguous (memory) contiguous (file) full | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-contig-read-full.json | |
- name: Test h5bench SYNC read 1D contiguous (memory) contiguous (file) partial | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-contig-read-partial.json | |
- name: Test h5bench SYNC read 1D contiguous (memory) contiguous (file) strided | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-1d-contig-contig-read-strided.json | |
- name: Test h5bench SYNC read 2D contiguous (memory) contiguous (file) full | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-contig-contig-read-full.json | |
- name: Test h5bench SYNC read 3D contiguous (memory) contiguous (file) full | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/sync-write-2d-contig-contig-read-full.json | |
- name: Test h5bench SYNC write unlimited | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure ../samples/sync-write-unlimited.json | |
- name: Test h5bench SYNC overwrite | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure ../samples/sync-overwrite.json | |
- name: Test h5bench SYNC append | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure ../samples/sync-append.json | |
- name: Test h5bench SYNC exerciser | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure ../samples/sync-exerciser.json | |
- name: Test h5bench SYNC metadata | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure ../samples/sync-metadata.json | |
- name: Test h5bench SYNC amrex | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure ../samples/sync-amrex.json | |
- name: Test h5bench SYNC openpmd | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure ../samples/sync-openpmd.json | |
- name: Test h5bench SYNC e3sm | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure ../samples/sync-e3sm.json | |
- name: Test h5bench SYNC macsio | |
run: | | |
export HDF5_HOME=/opt/hdf5 | |
export ABT_HOME=/opt/argobots | |
export ASYNC_HOME=/opt/vol-async | |
export LD_LIBRARY_PATH=$ASYNC_HOME/lib:$HDF5_HOME/lib:$ABT_HOME/lib:$LD_LIBRARY_PATH | |
cd build-sync | |
./h5bench --debug --abort-on-failure ../samples/sync-macsio.json | |
- name: Test h5bench ASYNC write/read | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-read-contig-1d-small.json | |
./h5bench --debug --abort-on-failure ../samples/async-write-read-contig-1d-small.json | |
- name: Test h5bench ASYNC write 1D contiguous (memory) strided (file) | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-1d-contig-strided.json | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/async-write-1d-contig-strided.json | |
- name: Test h5bench ASYNC write 1D contiguous (memory) contiguous (file) | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-1d-contig-contig.json | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/async-write-1d-contig-contig.json | |
- name: Test h5bench ASYNC write 1D contiguous (memory) interleaved (file) | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-1d-contig-interleaved.json | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/async-write-1d-contig-interleaved.json | |
- name: Test h5bench ASYNC write 1D interleaved (memory) contiguous (file) | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-1d-interleaved-contig.json | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/async-write-1d-interleaved-contig.json | |
- name: Test h5bench ASYNC write 1D interleaved (memory) interleaved (file) | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-1d-interleaved-interleaved.json | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/async-write-1d-interleaved-interleaved.json | |
- name: Test h5bench ASYNC write 2D contiguous (memory) contiguous (file) | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-2d-contig-contig.json | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/async-write-2d-contig-contig.json | |
- name: Test h5bench ASYNC write 2D contiguous (memory) interleaved (file) | |
run: | | |
current="$PWD" | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-2d-contig-interleaved.json | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/async-write-2d-contig-interleaved.json | |
- name: Test h5bench ASYNC write 2D interleaved (memory) contiguous (file) | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-2d-interleaved-contig.json | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/async-write-2d-interleaved-contig.json | |
- name: Test h5bench ASYNC write 2D interleaved (memory) interleaved (file) | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-2d-interleaved-interleaved.json | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/async-write-2d-interleaved-interleaved.json | |
- name: Test h5bench ASYNC write 3D contiguous (memory) contiguous (file) | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-3d-contig-contig.json | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/async-write-3d-contig-contig.json | |
- name: Test h5bench ASYNC read 1D contiguous (memory) contiguous (file) full | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-1d-contig-contig-read-full.json | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/async-write-1d-contig-contig-read-full.json | |
- name: Test h5bench ASYNC read 1D contiguous (memory) contiguous (file) partial | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-1d-contig-contig-read-partial.json | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/async-write-1d-contig-contig-read-partial.json | |
- name: Test h5bench ASYNC read 1D contiguous (memory) contiguous (file) strided | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-1d-contig-contig-read-strided.json | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/async-write-1d-contig-contig-read-strided.json | |
- name: Test h5bench ASYNC read 2D contiguous (memory) contiguous (file) full | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-2d-contig-contig-read-full.json | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/async-write-2d-contig-contig-read-full.json | |
- name: Test h5bench ASYNC read 3D contiguous (memory) contiguous (file) full | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-write-2d-contig-contig-read-full.json | |
./h5bench --debug --abort-on-failure --validate-mode ../samples/async-write-2d-contig-contig-read-full.json | |
- name: Test h5bench ASYNC amrex | |
run: | | |
export HDF5_DIR=/opt/hdf5 | |
export ABT_DIR=/opt/argobots | |
export ASYNC_DIR=/opt/vol-async | |
export HDF5_ASYNC_MAX_MEM_MB=1024 | |
cd build-async | |
python3 ../samples/update.py ../samples/async-amrex.json | |
./h5bench --debug --abort-on-failure ../samples/async-amrex.json | |
- name: Setup tmate session | |
if: ${{ failure() }} | |
uses: mxschmitt/action-tmate@v3 | |
- name: Upload artifact | |
if: always() | |
uses: actions/upload-artifact@v2 | |
with: | |
name: test | |
path: build*/storage/**/std* | |
retention-days: 5 |