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Immunarch 0.8.0

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@Alexander230 Alexander230 released this 18 Oct 15:28
· 46 commits to master since this release
bc90fed

BCR pipeline now requires less columns in the input data: only nucleotide sequences of FR1-4 and CDR1-3 regions are needed
Bugfixes and performance improvements in BCR pipeline
Removed arguments .align_j_gene from repGermline() and .verbose_output from repAlignLineage() that are not needed anymore
seqDist() and seqCluster() now support auto-trimming of extra information from gene columns for proper cluster naming
New .trim_genes argument for seqDist() that allows to disable auto-trimming (useful if used columns are not ones with genes)
Improved clustering in seqCluster()
Removed some false warning that appeared on vis() calls