>>> NOTE: isb-cgc uses the isb-cgc-webapp branch. Instructions for building pathology viewer VM can be found in that branch.

QuIP is a web accessible toolset designed to support analysis, management, and exploration of whole slide tissue images for cancer research. The QuIP system consists of a set of docker containers, which provide analysis execution and data management backend services, and web applications to load and visualize whole slide tissue images (in OpenSlide supported formats), run nuclear segmentation analyses on image tiles, and visualize and explore the analysis results.