Releases: isoverse/isoreader
Releases · isoverse/isoreader
CRAN release
CRAN release
Major Changes
- none
Bug Fixes
- issue with random seed in parallel computing (#165) caused crashed on some operating systems
CRAN release / JOSS archive
Major changes
- functions for previously deprecated .rda file format removed
- R version (>= 4.0.0) and dependency version requirements clarified
- dependencies simplified (openxlsx, feather, xml2 and rhdf5 are now optional extensions)
Bug fixes
- dependency on pandoc removed
First CRAN release of isoreader
Major Features
Reading isotope ratio mass spectrometry (IRMS) data files
This package currently supports reading the following raw data files:
- continuous flow data files from mass spectrometers run by Isodat and IonOS software (
?iso_read_continuous_flow
) - dual inlet data files from mass spectrometers run by Isodat and Nu software (
?iso_read_dual_inlet
) - scan data files from mass spectrometers run by Isodat software (
?iso_read_scan
)
Aggregating data from files
This package provides the following data aggregation and data processing functionality for all supported data files:
- aggregating file information including sequence line data (
?iso_get_file_info
) - aggregating raw mass spectrometric data (
?iso_get_raw_data
) - aggregating mass spectrometric background data (
?iso_get_bgrd_data
) - aggregating vendor-specific data tables if provided in raw file formats (
?iso_get_vendor_data_table
) - aggregating information on detector resistors if included in raw file formats (
?iso_get_resistors
) - aggregating information on internal isotope standards if included in raw file formats (
?iso_get_standards
) - processing file information with tidyverse-equivalent
select
,rename
,mutate
andfilter
functions (?iso_filter_files
,?iso_select_file_info
,?iso_rename_file_info
,?iso_mutate_file_info
) - adding file information with
?iso_add_file_info
to simplify sequential join operations
Exporting information
This package provides the following data export functionality for all supported data files:
- export to open Excel (.xslx) with
?iso_export_to_excel
- export to the Python/R cross-over feather file format with
?iso_export_to_feather
Release for Isoverse Workshop March 2020
Merge pull request #109 from isoverse/dev upgrade master to version 1.1.4
CRAN pre-release beta2
fixes an important windows binary file error from v1.1
CRAN pre-release beta
Merge pull request #95 from isoverse/dev update master to version 1.0.17
Version used in 2018 Silverman et al. SI
Tag for most recent version at the time of the 2018 Silverman et al. SI (since no official CRAN release existed yet).