This project is licensed under the terms of the MIT license. Copyright (c) 2015 Lagnel Jacques last update: Jacques Lagnel (28/02/2017) lagnel 'at' hcmr.gr
KEGG_enrichment4nonmodel
This package aims to do KEGG pathways assigment and performs KEGG enrichment analyses for non model species. It uses enzymes (EC number) produced from Blast2GO annotation.
KEGG_enrichment4nonmodel conducts the following steps:
- Get the KEGGs pathways and EC to KO
- Run Enrichment
- Build statistics csv file You have to provide:
Linux computer or cluster (Beowulf type): perl, bash, R, Bioconductor
none
Example: