This is the directory for the assembling and binning of metagenomic sequencing data of Phormidium pseudopriestleyi.
- Snakefile: This is a snakeflow of my workflow. It takes a metagenomic sequencing from Lake Fryxell mats and a lab culture of P. pseudopriestleyi and assembles them separately, and then as a coassembly. Then anvi'o is used to bin the metagenome assembly.
- scripts: These are extra analyses scripts.
- envs, peloton, and modules.pel: These are files necessary for running snakemake on peloton.