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blog/2016-10-30-farthest-points/index.html

@@ -312,7 +312,7 @@ <h1 class="title">Finding the Farthest Points in a Point Cloud</h1>
 <span id="cb2-17"><a href="#cb2-17" aria-hidden="true" tabindex="-1"></a><span class="fu">plot</span>(mat, <span class="at">asp =</span> <span class="dv">1</span>, <span class="at">xlab =</span> <span class="st">""</span>, <span class="at">ylab =</span> <span class="st">""</span>)</span>
 <span id="cb2-18"><a href="#cb2-18" aria-hidden="true" tabindex="-1"></a><span class="fu">points</span>(mat[ind, ], <span class="at">pch =</span> <span class="dv">19</span>)</span>
 <span id="cb2-19"><a href="#cb2-19" aria-hidden="true" tabindex="-1"></a><span class="fu">text</span>(mat[ind, ], <span class="at">adj =</span> <span class="fu">c</span>(<span class="dv">0</span>, <span class="sc">-</span><span class="fl">1.5</span>))</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
-<div class="cell quarto-layout-panel" data-layout-ncol="2" data-fig-lab="greedy-approach">
+<div class="cell quarto-layout-panel" data-fig-lab="greedy-approach" data-layout-ncol="2">
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 <div class="quarto-layout-cell" style="flex-basis: 50.0%;justify-content: flex-start;">
 <div class="quarto-figure quarto-figure-center">
@@ -358,7 +358,7 @@ <h1 class="title">Finding the Farthest Points in a Point Cloud</h1>
 <span id="cb4-14"><a href="#cb4-14" aria-hidden="true" tabindex="-1"></a><span class="fu">plot</span>(mat, <span class="at">asp =</span> <span class="dv">1</span>, <span class="at">xlab =</span> <span class="st">""</span>, <span class="at">ylab =</span> <span class="st">""</span>)</span>
 <span id="cb4-15"><a href="#cb4-15" aria-hidden="true" tabindex="-1"></a><span class="fu">points</span>(mat[r, ], <span class="at">pch =</span> <span class="dv">19</span>)</span>
 <span id="cb4-16"><a href="#cb4-16" aria-hidden="true" tabindex="-1"></a><span class="fu">text</span>(mat[r, ], <span class="at">adj =</span> <span class="fu">c</span>(<span class="dv">0</span>, <span class="sc">-</span><span class="fl">1.5</span>))</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
-<div class="cell quarto-layout-panel" data-layout-ncol="2" data-fig-lab="new-approach">
+<div class="cell quarto-layout-panel" data-fig-lab="new-approach" data-layout-ncol="2">
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 <div class="quarto-layout-cell" style="flex-basis: 50.0%;justify-content: flex-start;">
 <div class="quarto-figure quarto-figure-center">

blog/2024-05-22-phd-thesis/index.html

@@ -290,7 +290,7 @@ <h1 class="title">PhD Thesis</h1>
 <div id="fig-cover" class="lightbox quarto-figure quarto-figure-center quarto-float anchored page-columns page-full">
 <figure class="quarto-float quarto-float-fig figure page-columns page-full">
 <div aria-describedby="fig-cover-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
-<a href="front-cover.png" class="lightbox" data-gallery="quarto-lightbox-gallery-1" data-glightbox="description: .lightbox-desc-1"><img src="front-cover.png" class="border img-fluid figure-img" width="300"></a>
+<a href="front-cover.png" class="lightbox" data-glightbox="description: .lightbox-desc-1" data-gallery="quarto-lightbox-gallery-1"><img src="front-cover.png" class="border img-fluid figure-img" width="300"></a>
 </div>
 <figcaption class="quarto-float-caption-margin quarto-float-caption quarto-float-fig margin-caption" id="fig-cover-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;1: The cover of my thesis. The image features a subset of the elastic net path for the famous diabetes data set.
@@ -382,7 +382,7 @@ <h2 class="anchored" data-anchor-id="paper-2">Paper 2</h2>
 <div id="fig-paper2" class="lightbox quarto-figure quarto-figure-center quarto-float anchored page-columns page-full">
 <figure class="quarto-float quarto-float-fig figure page-columns page-full">
 <div aria-describedby="fig-paper2-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
-<a href="paper2-highlight.png" class="lightbox" data-gallery="quarto-lightbox-gallery-2" data-glightbox="description: .lightbox-desc-2"><img src="paper2-highlight.png" class="img-fluid figure-img"></a>
+<a href="paper2-highlight.png" class="lightbox" data-glightbox="description: .lightbox-desc-2" data-gallery="quarto-lightbox-gallery-2"><img src="paper2-highlight.png" class="img-fluid figure-img"></a>
 </div>
 <figcaption class="quarto-float-caption-margin quarto-float-caption quarto-float-fig margin-caption" id="fig-paper2-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;2: Look-ahead screening for 20 randomly selected features from the <em>leukemia</em> data set. Blue squares indicate that the respective feature can be discarded from the problem for that step of the regularization path.
@@ -403,7 +403,7 @@ <h2 class="anchored" data-anchor-id="paper-4">Paper 4</h2>
 <div id="fig-paper4" class="lightbox fig-cap-location-bottom quarto-figure quarto-figure-center quarto-float anchored page-columns page-full">
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-<a href="paper4-highlight.svg" class="lightbox" data-gallery="quarto-lightbox-gallery-3" data-glightbox="description: .lightbox-desc-3"><img src="paper4-highlight.svg" class="fig-cap-location-bottom img-fluid figure-img"></a>
+<a href="paper4-highlight.svg" class="lightbox" data-glightbox="description: .lightbox-desc-3" data-gallery="quarto-lightbox-gallery-3"><img src="paper4-highlight.svg" class="fig-cap-location-bottom img-fluid figure-img"></a>
 </div>
 <figcaption class="quarto-float-caption-margin quarto-float-caption quarto-float-fig margin-caption" id="fig-paper4-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;3: A schematic over how a benchmark is set up and run using benchopt. The benchmark consists of a set of files that define objectives, datasets, and solvers. When the user runs benchopt, the package combines all of the possible combinations of objectives, datasets, and solvers and outputs a neatly formatted database of the results.
@@ -419,7 +419,7 @@ <h2 class="anchored" data-anchor-id="paper-5">Paper 5</h2>
 <div id="fig-paper5" class="lightbox quarto-figure quarto-figure-center quarto-float anchored page-columns page-full">
 <figure class="quarto-float quarto-float-fig figure page-columns page-full">
 <div aria-describedby="fig-paper5-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
-<a href="paper5-highlight.svg" class="lightbox" data-gallery="quarto-lightbox-gallery-4" data-glightbox="description: .lightbox-desc-4"><img src="paper5-highlight.svg" class="img-fluid figure-img" width="700"></a>
+<a href="paper5-highlight.svg" class="lightbox" data-glightbox="description: .lightbox-desc-4" data-gallery="quarto-lightbox-gallery-4"><img src="paper5-highlight.svg" class="img-fluid figure-img" width="700"></a>
 </div>
 <figcaption class="quarto-float-caption-margin quarto-float-caption quarto-float-fig margin-caption" id="fig-paper5-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;4: An illustration of the hybrid coordinate descent solver we developed for SLOPE, showing progress until convergence for the coordinate descent solver (CD) that we use as part of the hybrid method, our hybrid method, and proximal gradient descent (PGD).
@@ -434,7 +434,7 @@ <h2 class="anchored" data-anchor-id="paper-6">Paper 6</h2>
 <div id="fig-paper6" class="lightbox quarto-figure quarto-figure-center quarto-float anchored page-columns page-full">
 <figure class="quarto-float quarto-float-fig figure page-columns page-full">
 <div aria-describedby="fig-paper6-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
-<a href="paper6-highlight.svg" class="lightbox" data-gallery="quarto-lightbox-gallery-5" data-glightbox="description: .lightbox-desc-5"><img src="paper6-highlight.svg" class="img-fluid figure-img" width="700"></a>
+<a href="paper6-highlight.svg" class="lightbox" data-glightbox="description: .lightbox-desc-5" data-gallery="quarto-lightbox-gallery-5"><img src="paper6-highlight.svg" class="img-fluid figure-img" width="700"></a>
 </div>
 <figcaption class="quarto-float-caption-margin quarto-float-caption quarto-float-fig margin-caption" id="fig-paper6-caption-0ceaefa1-69ba-4598-a22c-09a6ac19f8ca">
 Figure&nbsp;5: Estimated coefficients from lasso and ridge regression for a two-feature problem where one of the features has a quasi-normal distribution (values deterministically set via the quantile function), with standard deviation 1/2, and the other is a binary (quasi-Bernoulli) feature with class-balance <span class="math inline">\(q\)</span>. The normal feature is standardized in every case, whereas the binary feature is scaled with <span class="math inline">\((q - q^2)^\delta\)</span>—its variance to the power of <span class="math inline">\(\delta\)</span>. In other words, we have no scaling for <span class="math inline">\(\delta=0\)</span>, standard deviation scaling when <span class="math inline">\(\delta=1/2\)</span>, and variance-scaling when <span class="math inline">\(\delta = 1\)</span>.
@@ -937,7 +937,7 @@ <h2 class="anchored" data-anchor-id="defense">Defense</h2>
     </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"descPosition":"bottom","loop":false,"closeEffect":"zoom","openEffect":"zoom","selector":".lightbox"});
+<script>var lightboxQuarto = GLightbox({"openEffect":"zoom","descPosition":"bottom","loop":false,"closeEffect":"zoom","selector":".lightbox"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
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blog/2024-05-30-moloch/index.html

@@ -297,7 +297,7 @@ <h2 class="anchored" data-anchor-id="getting-started">Getting Started</h2>
 <p>The design of the theme does not stray far from the original Metropolis design (and will not do so in the future either). Below is a simple example of a few slides of the theme.</p>
 <div class="quarto-figure quarto-figure-center page-columns page-full">
 <figure class="figure page-columns page-full">
-<p><a href="https://raw.githubusercontent.com/jolars/moloch/main/assets/screenshot.svg" class="lightbox" data-glightbox="description: .lightbox-desc-1" data-gallery="quarto-lightbox-gallery-1" title="The first four slides of a presentation using Moloch."><img src="https://raw.githubusercontent.com/jolars/moloch/main/assets/screenshot.svg" class="img-fluid figure-img" alt="The first four slides of a presentation using Moloch."></a></p>
+<p><a href="https://raw.githubusercontent.com/jolars/moloch/main/assets/screenshot.svg" class="lightbox" data-gallery="quarto-lightbox-gallery-1" data-glightbox="description: .lightbox-desc-1" title="The first four slides of a presentation using Moloch."><img src="https://raw.githubusercontent.com/jolars/moloch/main/assets/screenshot.svg" class="img-fluid figure-img" alt="The first four slides of a presentation using Moloch."></a></p>
 <figcaption class="margin-caption">The first four slides of a presentation using Moloch.</figcaption>
 </figure>
 </div>
@@ -317,10 +317,11 @@ <h2 class="anchored" data-anchor-id="getting-started">Getting Started</h2>
 <span id="cb2-10"><a href="#cb2-10" aria-hidden="true" tabindex="-1"></a><span class="kw">\begin</span>{<span class="ex">document</span>}</span>
 <span id="cb2-11"><a href="#cb2-11" aria-hidden="true" tabindex="-1"></a>  <span class="fu">\maketitle</span></span>
 <span id="cb2-12"><a href="#cb2-12" aria-hidden="true" tabindex="-1"></a>  <span class="kw">\section</span>{First Section}</span>
-<span id="cb2-13"><a href="#cb2-13" aria-hidden="true" tabindex="-1"></a>  <span class="kw">\begin</span>{<span class="ex">frame</span>}{First Frame}</span>
-<span id="cb2-14"><a href="#cb2-14" aria-hidden="true" tabindex="-1"></a>    Hello, world!</span>
-<span id="cb2-15"><a href="#cb2-15" aria-hidden="true" tabindex="-1"></a>  <span class="kw">\end</span>{<span class="ex">frame</span>}</span>
-<span id="cb2-16"><a href="#cb2-16" aria-hidden="true" tabindex="-1"></a><span class="kw">\end</span>{<span class="ex">document</span>}</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
+<span id="cb2-13"><a href="#cb2-13" aria-hidden="true" tabindex="-1"></a>  <span class="kw">\begin</span>{<span class="ex">frame</span>}</span>
+<span id="cb2-14"><a href="#cb2-14" aria-hidden="true" tabindex="-1"></a>    <span class="fu">\frametitle</span>{First Frame}</span>
+<span id="cb2-15"><a href="#cb2-15" aria-hidden="true" tabindex="-1"></a>    Hello, world!</span>
+<span id="cb2-16"><a href="#cb2-16" aria-hidden="true" tabindex="-1"></a>  <span class="kw">\end</span>{<span class="ex">frame</span>}</span>
+<span id="cb2-17"><a href="#cb2-17" aria-hidden="true" tabindex="-1"></a><span class="kw">\end</span>{<span class="ex">document</span>}</span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
 <p>See <a href="http://mirrors.ctan.org/macros/latex/contrib/beamer-contrib/themes/moloch/moloch.pdf">the package documentation</a> to learn more about the theme and its various options. If you’re used to Metropolis, then you mostly need to know that <code>\metroset</code> has been replaced by <code>\molochset</code> and that some things are no longer supported, which is precisely what we’ll dig into in the next section!</p>
 </section>
 <section id="sec-changes" class="level2 page-columns page-full">
@@ -919,7 +920,7 @@ <h3 class="anchored" data-anchor-id="acknowledgements">Acknowledgements</h3>
     </div>
   </div>
 </footer>
-<script>var lightboxQuarto = GLightbox({"selector":".lightbox","loop":false,"closeEffect":"zoom","openEffect":"zoom","descPosition":"bottom"});
+<script>var lightboxQuarto = GLightbox({"selector":".lightbox","descPosition":"bottom","loop":false,"openEffect":"zoom","closeEffect":"zoom"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;