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10 refactoring jim for an easier adoption for production in lvk #27

Merged
merged 102 commits into from
Sep 18, 2023
Merged

10 refactoring jim for an easier adoption for production in lvk #27

merged 102 commits into from
Sep 18, 2023

Commits on Feb 14, 2023

  1. started refactoring

    @maxisi
    maxisi committed Feb 14, 2023
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  2. compute response

    @maxisi
    maxisi committed Feb 14, 2023
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Commits on Feb 17, 2023

  1. detector projection

    @maxisi
    maxisi committed Feb 17, 2023
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Commits on May 30, 2023

  1. bug fixes (td ap prep)

    @maxisi
    maxisi committed May 30, 2023
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  2. earth rotation APs draft

    @maxisi
    maxisi committed May 30, 2023
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Commits on Jul 5, 2023

  1. Merge pull request #23 from kazewong/max-dev 

    Syncing Max's developement to main of the rework branch
    @kazewong
    kazewong authored Jul 5, 2023
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  2. Merge pull request #24 from kazewong/main 

    Create python-publish.yml
    @kazewong
    kazewong authored Jul 5, 2023
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  3. Blow examples up

    @kazewong
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  4. Nuke jaxgw folder

    @kazewong
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  5. Nuke more stuff

    @kazewong
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  6. Fetch examples from documentation branch

    @kazewong
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  7. More nukes

    @kazewong
    kazewong committed Jul 5, 2023
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  8. Kick lal out of script

    @kazewong
    kazewong committed Jul 5, 2023
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  9. Remove obsolete tests

    @kazewong
    kazewong committed Jul 5, 2023
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  10. I think using equinox for some of the classes will simplify the API t… 

    …remendously
    @kazewong
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  11. Scaffolding classes

    @kazewong
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  12. Scaffolding

    @kazewong
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  13. Scaffolding

    @kazewong
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Commits on Jul 6, 2023

  1. spread structure

    @kazewong
    kazewong committed Jul 6, 2023
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  2. Update jim

    @kazewong
    kazewong committed Jul 6, 2023
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  3. Refactored the polarization class

    @kazewong
    kazewong committed Jul 6, 2023
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  4. Polarization class seems to wrok fine even with jitting

    @kazewong
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  5. The detector script seem pretty incomplete. 

    I am constructing the script from scratch
    @kazewong
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  6. Update detector

    @kazewong
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  7. Detector seems working okay now

    @kazewong
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  8. The detector data seems odd

    @kazewong
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  9. Had a GPT debug moment. 

    It is the epoch
    @kazewong
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  10. Add scaffolding to jim

    @kazewong
    kazewong committed Jul 6, 2023
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Commits on Jul 7, 2023

  1. Teach jim how to maixmize likelihood

    @kazewong
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Commits on Jul 11, 2023

  1. Nuke useless data

    @kazewong
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  2. Add sampler configuration in JIm

    @kazewong
    kazewong committed Jul 11, 2023
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  3. Make prior abstract class

    @kazewong
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  4. Make jim posterior more consistent with flowMC

    @kazewong
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  5. Make it more consistent with flowMC

    @kazewong
    kazewong committed Jul 11, 2023
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  6. Change jim parsing

    @kazewong
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Commits on Jul 12, 2023

  1. Fixing prior inconsistency

    @kazewong
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  2. maximization seems working

    @kazewong
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  3. It runs now, but it has a lot to fix

    @kazewong
    kazewong committed Jul 12, 2023
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Commits on Jul 14, 2023

  1. Update

    @kazewong
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Commits on Jul 15, 2023

  1. Put local argument in Jim

    @kazewong
    kazewong committed Jul 15, 2023
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  2. Update

    @kazewong
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  3. Tweaked prior transforms

    @kazewong
    kazewong committed Jul 15, 2023
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  4. Update GW150914.py example

    @kazewong
    kazewong committed Jul 15, 2023
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  5. Remove empty script

    @kazewong
    kazewong committed Jul 15, 2023
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  6. Realign doc string style

    @kazewong
    kazewong committed Jul 15, 2023
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  7. Add mkdocs stuff

    @kazewong
    kazewong committed Jul 15, 2023
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  8. Add theme

    @kazewong
    kazewong committed Jul 15, 2023
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  9. Update

    @kazewong
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  10. autodoc renders but it is extremely ugly

    @kazewong
    kazewong committed Jul 15, 2023
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  11. Update requirement

    @kazewong
    kazewong committed Jul 15, 2023
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  12. Update utils

    @kazewong
    kazewong committed Jul 15, 2023
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  13. Scaffold stuffs

    @kazewong
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Commits on Jul 19, 2023

  1. add doc string

    @kazewong
    kazewong committed Jul 19, 2023
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  2. add comments

    @kazewong
    kazewong committed Jul 19, 2023
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  3. bug fix

    @kazewong
    kazewong committed Jul 19, 2023
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Commits on Jul 20, 2023

  1. Correctly generates noise in both the frequency and time domain

    @tedwards2412
    tedwards2412 committed Jul 20, 2023
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  2. Added function to generate noise psds

    @tedwards2412
    tedwards2412 committed Jul 20, 2023
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  3. Removing useless import

    @tedwards2412
    tedwards2412 committed Jul 20, 2023
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  4. added check to see if files already there

    @tedwards2412
    tedwards2412 committed Jul 20, 2023
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  5. adding FIXME

    @tedwards2412
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Commits on Jul 27, 2023

  1. Merge pull request #26 from kazewong/time_domain_noise_generator 

    Looks good for merging into the development branch to me. Need to work on integrating
    @kazewong
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  2. arcsin and arccos are use avoid nan in the transformer. 

    There must be a better way to solve this
    @kazewong
    kazewong committed Jul 27, 2023
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  3. update requirement

    @kazewong
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Commits on Jul 31, 2023

  1. Scaffold injection recovery

    @kazewong
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  2. Set injection parser

    @kazewong
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  3. update injection recovery

    @kazewong
    kazewong committed Jul 31, 2023
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  4. UIpdate noise generation

    @kazewong
    kazewong committed Jul 31, 2023
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  5. Add detector injection function

    @kazewong
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  6. Change waveform into ABC

    @kazewong
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  7. InjectionRecovery now runs. 

    Nuking old script
    @kazewong
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  8. It runs, but we need auto tune or good initialization

    @kazewong
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Commits on Aug 2, 2023

  1. Fix typo

    @kazewong
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Commits on Aug 11, 2023

  1. Update prior.py

    @AlexanderVerhaeghe
    AlexanderVerhaeghe authored Aug 11, 2023
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  2. Update prior.py

    @AlexanderVerhaeghe
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  3. Update prior.py

    @kazewong
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Commits on Aug 14, 2023

  1. Merge pull request #34 from AlexanderVerhaeghe/10-refactoring-jim-for… 

    …-an-easier-adoption-for-production-in-lvk-1

Update prior.py
    @kazewong
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Commits on Aug 17, 2023

  1. Update prior.py 

    Uniform prior adoption has bug in indexing. Fixed and made more concise.
    @kazewong
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  2. tested and fixed

    @kazewong
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Commits on Aug 18, 2023

  1. Correcting prior and adding pv2

    @tedwards2412
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Commits on Aug 19, 2023

  1. Update prior.py

    @kazewong
    kazewong authored Aug 19, 2023
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  2. Merge pull request #35 from kazewong/small_corrections 

    Correcting prior and adding pv2
    @kazewong
    kazewong authored Aug 19, 2023
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Commits on Aug 24, 2023

  1. Update prior

    @kazewong
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  2. turn maximize likelihood back on in GW150914.

    @kazewong
    kazewong committed Aug 24, 2023
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Commits on Sep 3, 2023

  1. format with black

    @kazewong
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  2. black format

    @kazewong
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  3. update gitignore

    @kazewong
    kazewong committed Sep 3, 2023
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  4. Add other spin components to Pv2

    @kazewong
    kazewong committed Sep 3, 2023
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  5. update prior to work with dictionary input

    @kazewong
    kazewong committed Sep 3, 2023
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  6. Make likelihood deal with dictionary input instead of array input

    @kazewong
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  7. Jim should support dictionary naming in the likelihood now

    @kazewong
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  8. Heterodyne working

    @kazewong
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  9. Add heterodyning line in GW150914

    @kazewong
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  10. black formatting

    @kazewong
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Commits on Sep 5, 2023

  1. Delete files that are migrated

    @kazewong
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  2. Update InjectionRecovery.py

    @kazewong
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  3. Update InjectionRecovery to work with IMRPhenomPv2 and with heterodyning

    @kazewong
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  4. Prior may need some adjustment, 

    and nansum in heterodyne does not work with MALA
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Commits on Sep 7, 2023

  1. testing update

    @kazewong
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Commits on Sep 15, 2023

  1. This setting for Pv2 seems to work okay. 

    Finish within an hour.
    @kazewong
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  2. More safe parameters

    @kazewong
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Commits on Sep 16, 2023

  1. Smaller network seems to improve quality quite a bit

    @kazewong
    kazewong committed Sep 16, 2023
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  2. testing NF parameters

    @kazewong
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