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Various improvements related to the new X-ray transform implemementation. #461

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merged 49 commits into from
Nov 2, 2023

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Various improvements, mostly related to the new X-ray transform implemementation, including renaming of tomographic projector classes for consistency.

bwohlberg and others added 30 commits August 7, 2023 14:31
* Add 2d projector and code to time it

* Clean up

* Add back projection

* Add test

* Add timing results to example

* Start to add new example

* Update data

* Address mypy

* Address isort

* Try to fix tables in notebook

* Update submodule

* Rename XRayProject to XRayTransform

* Minor edits

---------

Co-authored-by: Michael McCann <[email protected]>
Co-authored-by: Michael-T-McCann <[email protected]>
Co-authored-by: Michael McCann <[email protected]>
@bwohlberg bwohlberg added the improvement Improvement of existing code, including addressing of omissions or inconsistencies label Oct 26, 2023
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codecov bot commented Oct 26, 2023

Codecov Report

Merging #461 (60e453c) into main (bcb1eab) will decrease coverage by 0.02%.
The diff coverage is 87.50%.

@@            Coverage Diff             @@
##             main     #461      +/-   ##
==========================================
- Coverage   94.58%   94.56%   -0.02%     
==========================================
  Files          87       88       +1     
  Lines        5495     5498       +3     
==========================================
+ Hits         5197     5199       +2     
- Misses        298      299       +1     
Flag Coverage Δ
unittests 94.56% <87.50%> (-0.02%) ⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Files Coverage Δ
scico/flax/examples/data_generation.py 74.10% <100.00%> (-0.72%) ⬇️
scico/linop/__init__.py 100.00% <100.00%> (ø)
scico/linop/abel.py 98.21% <100.00%> (ø)
scico/linop/xray/__init__.py 100.00% <100.00%> (ø)
scico/linop/xray/_xray.py 100.00% <100.00%> (ø)
scico/operator/_operator.py 94.92% <ø> (ø)
scico/optimize/_admmaux.py 96.76% <ø> (-0.02%) ⬇️
scico/linop/xray/svmbir.py 82.20% <85.71%> (ø)
scico/linop/xray/astra.py 79.65% <57.14%> (ø)

@bwohlberg bwohlberg merged commit 27e2aec into main Nov 2, 2023
19 checks passed
@bwohlberg bwohlberg deleted the brendt/rename branch November 2, 2023 20:53
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2 participants