added "junc_pen" to python accordingly

lh3 · Oct 14, 2024 · 95807a2 · 95807a2
1 parent a4c93e9
commit 95807a2
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/python/cmappy.pxd b/python/cmappy.pxd
@@ -39,7 +39,7 @@ cdef extern from "minimap.h":
 		int transition
 		int sc_ambi
 		int noncan
-		int junc_bonus
+		int junc_bonus, junc_pen
 		int zdrop, zdrop_inv
 		int end_bonus
 		int min_dp_max