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Merge pull request #7 from ljacquin/perf/optimize-krmm-computation
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update: modify description
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ljacquin authored Apr 21, 2024
2 parents 075a750 + 0b516c2 commit 4bb9715
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2 changes: 1 addition & 1 deletion DESCRIPTION
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Expand Up @@ -7,7 +7,7 @@ Author: Laval Jacquin [aut, cre]
Maintainer: Laval Jacquin <[email protected]>
Description: Solves kernel ridge regression, within the the mixed model framework, for the linear, polynomial, Gaussian, Laplacian and ANOVA kernels. The model components (i.e. fixed and random effects) and variance parameters are estimated using the expectation-maximization (EM) algorithm. All the estimated components and parameters, e.g. BLUP of dual variables and BLUP of random predictor effects for the linear kernel (also known as RR-BLUP), are available. The kernel ridge mixed model (KRMM) is described in Jacquin L, Cao T-V and Ahmadi N (2016) A Unified and Comprehensible View of Parametric and Kernel Methods for Genomic Prediction with Application to Rice. Front. Genet. 7:145. <doi:10.3389/fgene.2016.00145>.
Depends: R (>= 3.3.0)
Imports: stats,MASS,kernlab,cvTools,robustbase,foreach,doParallel,Matrix
Imports: stats,MASS,kernlab,cvTools,robustbase,foreach,parallel,doParallel,Matrix
License: GPL-2 | GPL-3
Encoding: UTF-8
LazyData: true
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1 change: 1 addition & 0 deletions NAMESPACE
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Expand Up @@ -5,6 +5,7 @@ import(kernlab)
import(cvTools)
import(robustbase)
import(foreach)
import(parallel)
import(doParallel)
import(Matrix)

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