Merge pull request #117 from malariagen/ahk_add_shapeit_mem_specs #289
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # This workflow validates all pipeline WDL files (those found in the pipelines/ directory) using the 'miniwdl' tool. | |
| name: ValidateWdl | |
| on: | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| jobs: | |
| validate_wdl_job: | |
| runs-on: ubuntu-latest | |
| name: Validate all wdl using miniwdl | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| repository: malariagen/pipelines | |
| - name: Set up Python 3.7 | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: 3.7 | |
| - name: Install mini-wdl | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip3 install miniwdl | |
| - name: Run miniwdl | |
| run: | | |
| ./scripts/validate_wdls.sh |