Fix incorrect logging (issue #319)

marbl · Jan 28, 2025 · 9a78f76 · 9a78f76
1 parent 9d8a620
commit 9a78f76
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/src/scripts/scaffolding/scaffold_graph.py b/src/scripts/scaffolding/scaffold_graph.py
@@ -183,7 +183,7 @@ def __init__(self, rukki_paths, telomere_locations_file, hic_alignment_file, mat
         else:
             max_comp_size = len(max(nx.weakly_connected_components(G), key=len))    
             if max_comp_size > ScaffoldGraph.MAX_COMPONENT_FOR_DISTANCES:
-                self.logger.info(f"Biggest component is too big {len(max_comp_size)}, not calculating pairwise distances")
+                self.logger.info(f"Biggest component is too big {max_comp_size}, not calculating pairwise distances")
             else:
                 self.logger.info("Calculating pairwise distances for assembly graph nodes")
                 self.dists = dict(nx.all_pairs_dijkstra_path_length(self.upd_G, weight=lambda u, v, d: self.upd_G.edges[u, v]['mid_length']))
@@ -1440,4 +1440,4 @@ def getPathColors(self, rukki_paths, graph):
                 path_colors[path_id] = 0
         return path_colors
 
-
+