VisCy 0.3.0rc1

Warning

This is a release candidate for testing.

VisCy 0.3.0 incorporates the representation learning task as a core feature.

Breaking change

The top-level CLI now supports both image translation and representation learning tasks. This required changes to configuration files. Concretely, data and model fields now require import paths to be specified. See the updated examples for reference on migrating existing virtual staining configs.

What's Changed

• Add script to visualize effective receptive field by @ziw-liu in #144
• adding VS hugginface demo by @edyoshikun in #172
• Single-cell representation learning by @ziw-liu in #153
• Vendor pad shape function by @ziw-liu in #189
• Fix module name spelling by @ziw-liu in #190
• Add new author to citation by @ziw-liu in #188
• Add links to hosted files and napari-iohub wiki by @ziw-liu in #192
• Bump MONAI to unpin NumPy by @ziw-liu in #194
• Add badges to readme by @ziw-liu in #197
• Simplify development installation by @ziw-liu in #198
• Fix validation loss aggregation in VSUNet by @ziw-liu in #202
• Expose prefetch_factor and persistent_worker for the HCS datamodule by @edyoshikun in #203

Full Changelog: v0.2.1...v0.3.0rc1