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CI #67

Workflow file for this run

name: CI
on:
# GitHub has started calling new repo's first branch "main" https://github.com/github/renaming
# The cookiecutter uses the "--initial-branch" flag when it runs git-init
push:
branches:
- "main"
pull_request:
branches:
- "main"
schedule:
# Weekly tests run on main by default:
# Scheduled workflows run on the latest commit on the default or base branch.
# (from https://help.github.com/en/actions/reference/events-that-trigger-workflows#scheduled-events-schedule)
- cron: "0 0 * * 0"
jobs:
# Check with ruff and black
lint_and_format:
name: Check for style and formatting violations with Ruff
runs-on: ubuntu-latest
steps:
- name: Check out code
uses: actions/checkout@v2
- name: Set up Python
uses: actions/setup-python@v2
with:
python-version: '3.10'
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install ruff
- name: Check style with Ruff
run: ruff check .
- name: Check formatting with Ruff
run: ruff format --check .
test:
name: Test on ${{ matrix.os }}, Python ${{ matrix.python-version }}
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ubuntu-latest]
python-version: ['3.10', '3.11', '3.12']
steps:
- uses: actions/checkout@v3
- name: Additional info about the build
shell: bash
run: |
uname -a
df -h
ulimit -a
- uses: mamba-org/setup-micromamba@v1
with:
environment-file: devtools/conda-envs/test_env.yaml
environment-name: test
create-args: >- # beware the >- instead of |, we don't split on newlines but on spaces
python=${{ matrix.python-version }}
- name: Install package
# conda setup requires this special shell
shell: bash -l {0}
run: |
python -m pip install . --no-deps
micromamba list
- name: Run tests
# conda setup requires this special shell
shell: bash -l {0}
run: |
pytest -v --cov=a3fe --cov-report=xml --color=yes a3fe/tests/
- name: Upload coverage reports to Codecov
uses: codecov/[email protected]
with:
token: ${{ secrets.CODECOV_TOKEN }}
slug: michellab/a3fe