This R package provides functionality to perform sample relationship
verification using different omic data types. Such as, 450k DNA
methylation data, RNA-sequencing or DNA based genotypes sequencing or
array based imputed.
Checkout the vignettes directory for a few examples.
First install devtools. Next use:
library(devtools)
install_github("molepi/omicsPrint")
Sometimes install_github fails with CA cert error. Try running
httr::set_config(httr::config( ssl_verifypeer = 0L)) before running
install_github!
Using git, e.g, use git clone and then build
and install the package from source:
git clone [email protected]:molepi/omicsPrint.git
R CMD build omicsPrint
R CMD INSTALL omicsPrint_x.y.z.tar.gz
Change _x.y.z. to the proper version you downloaded!
A few vignettes are provides showing applications of using omicsPrint to simulated and publicly available data: