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Merge pull request #1617 from monarch-initiative/issue-1360
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split adult acute respiratory distress syndrome from acute respirator…
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@cmungall
cmungall authored Jun 1, 2020
2 parents b0ca6a1 + e919b7a commit 448d399
Showing 1 changed file with 31 additions and 14 deletions.
45 changes: 31 additions & 14 deletions src/ontology/mondo-edit.obo
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Expand Up @@ -113775,40 +113775,28 @@ is_a: MONDO:0005093 {source="EFO:1000636"} ! skin disease

[Term]
id: MONDO:0006502
name: adult respiratory distress syndrome
name: acute respiratory distress syndrome
def: "Progressive and life-threatening pulmonary distress in the absence of an underlying pulmonary condition, usually following major trauma or surgery. Cases of neonatal respiratory distress syndrome are not included in this definition." [NCIT:C3353]
subset: gard_rare
subset: ordo_disease {source="Orphanet:70578"}
synonym: "acute lung injury" RELATED [GARD:0005698]
synonym: "acute respiratory distress syndrome" RELATED [GARD:0005698]
synonym: "adult acute respiratory distress syndrome" EXACT [MONDO:0019089]
synonym: "adult ARDS" EXACT [Orphanet:70578]
synonym: "adult RDS" EXACT [DOID:11394, NCIT:C3353]
synonym: "adult respiratory distress syndrome" EXACT [GARD:0005698, MONDO:0001278]
synonym: "adult respiratory distress syndrome, ARDS" EXACT [NCIT:C3353]
synonym: "ALI" RELATED [GARD:0005698]
synonym: "ARDS" EXACT [CSP2005:2596-8861, DOID:11394]
synonym: "increased-permeability pulmonary edema" RELATED [GARD:0005698]
synonym: "non-cardiogenic pulmonary edema" RELATED [DOID:11394, GARD:0005698]
synonym: "respiratory distress syndrome, adult" RELATED [GARD:0005698]
synonym: "shock lung" EXACT [DOID:11394, GARD:0005698, MTHICD9_2006:518.5]
synonym: "Stiff lung" RELATED [GARD:0005698]
xref: COHD:4195694 {source="MONDO:equivalentTo"}
xref: DOID:11394 {source="MONDO:equivalentTo"}
xref: EFO:1000637 {source="MONDO:equivalentTo"}
xref: GARD:0005698 {source="MONDO:equivalentTo"}
xref: ICD10:J80 {source="MONDO:equivalentTo", source="ORDO:70578/e", source="DOID:11394", source="Orphanet:70578"}
xref: MedDRA:10001052 {source="EFO:1000637"}
xref: MESH:D012128 {source="MONDO:equivalentTo", source="DOID:11394", source="EFO:1000637"}
xref: NCIT:C3353 {source="MONDO:equivalentTo", source="DOID:11394", source="MONDO:kboom-pr-0.95/0.86/0.77", source="EFO:1000637"}
xref: Orphanet:70578 {source="MONDO:equivalentTo"}
xref: SCTID:155627006 {source="DOID:11394"}
xref: SCTID:196150004 {source="DOID:11394"}
xref: SCTID:196154008 {source="DOID:11394"}
xref: SCTID:206281003 {source="DOID:11394"}
xref: SCTID:266411000 {source="DOID:11394"}
xref: SCTID:67782005 {source="MONDO:kboom-pr-0.96/0.83/1.68", source="MONDO:equivalentTo", source="DOID:11394"}
xref: UMLS:C0035222 {source="MONDO:equivalentTo", source="NCIT:C3353", source="DOID:11394"}
is_a: MONDO:0001208 {source="DOID:11394"} ! acute respiratory failure
is_a: MONDO:0002254 {source="MONDOLEX:0006502", source="NCIT:C3353"} ! syndromic disease
is_a: MONDO:0005087 {source="DOID:11394/inferred", source="EFO:1000637", source="MESH:D012128/inferred", source="linkedlifedata", source="linkedlifedata/inferred"} ! respiratory system disease
Expand Down Expand Up @@ -191562,6 +191550,7 @@ synonym: "HMD - hyaline membrane disease" EXACT [DOID:12716]
synonym: "hyaline Membrane disease" RELATED [OMIM:267450]
synonym: "hyaline membrane disease" EXACT [CSP2005:0726-3340, DOID:12716, Orphanet:70587]
synonym: "hyaline Membrane disease, formerly" RELATED [OMIM:267450]
synonym: "infant acute respiratory distress syndrome" EXACT [Orphanet:70587]
synonym: "infant acute respiratory distress syndrome" RELATED [Orphanet:70587]
synonym: "infant ARDS" EXACT [Orphanet:70587]
synonym: "infant respiratory distress syndrome" EXACT [Orphanet:70587]
Expand Down Expand Up @@ -191602,10 +191591,11 @@ xref: UMLS:C0020192 {source="MONDO:equivalentTo", source="Orphanet:70587", sourc
xref: UMLS:C0035220 {source="NCIT:C27560", source="MONDO:equivalentTo", source="Orphanet:70587", source="MEDGEN:kboom-pr94-c94"}
xref: UMLS:C0852283 {source="Orphanet:70587", source="MONDO:notFoundInDiseaseSubset"}
xref: UMLS:C1968593 {source="OMIM:267450", source="NCBI:mim2gene_medline", source="MONDO:equivalentTo", source="MEDGEN:kboom-pr87-c94"}
is_a: MONDO:0001208 {source="DOID:12716"} ! acute respiratory failure
is_a: MONDO:0002254 {source="MONDOLEX:0009971", source="NCIT:C27560"} ! syndromic disease
is_a: MONDO:0006502 {source="https://github.com/monarch-initiative/mondo/issues/1360"} ! acute respiratory distress syndrome
is_a: MONDO:0017016 {source="Orphanet:70587"} ! primary interstitial lung disease specific to childhood due to alveolar structure disorder
is_a: MONDO:0021113 {source="DOID:12716", source="MONDO:Redundant", source="NCIT:C27560", source="indirect"} ! respiratory failure
relationship: excluded_subClassOf MONDO:0001208 {source="DOID:12716"} ! acute respiratory failure
property_value: confidence "2.0000000000000004" xsd:double

[Term]
Expand Down Expand Up @@ -433039,6 +433029,33 @@ xref: ICD10:F16.183 {source="MONDO:relatedTo"}
is_a: MONDO:0024417 {source="https://orcid.org/0000-0001-5208-3432"} ! perceptual disorders
created_by: http://orcid.org/0000-0001-5208-3432

[Term]
id: MONDO:0100130
name: adult acute respiratory distress syndrome
def: "A very severe form of acute pulmonary failure secondary to capillary permeability impairment. The symptoms include dyspnea, hypotension and multivisceral failure. The disease is characterized by bilateral pulmonary infiltrates and severe hypoxemia due to increased alveolar-capillary permeability. The severity depends on the degree of alveolar epithelial injury, with a mortality rate of 30-50%." [Orphanet:70578]
subset: ordo_disease {source="Orphanet:70578"}
synonym: "adult acute respiratory distress syndrome" EXACT [MONDO:0019089]
synonym: "adult ARDS" EXACT [Orphanet:70578]
synonym: "adult RDS" EXACT [DOID:11394, NCIT:C3353]
synonym: "adult respiratory distress syndrome" EXACT [GARD:0005698, MONDO:0001278]
synonym: "adult respiratory distress syndrome, ARDS" EXACT [NCIT:C3353]
synonym: "respiratory distress syndrome, adult" EXACT [GARD:0005698]
xref: DOID:11394 {source="MONDO:equivalentTo"}
xref: MESH:D012128 {source="MONDO:equivalentTo", source="DOID:11394", source="EFO:1000637"}
xref: Orphanet:70578 {source="MONDO:equivalentTo"}
xref: SCTID:67782005 {source="MONDO:kboom-pr-0.96/0.83/1.68", source="MONDO:equivalentTo", source="DOID:11394"}
xref: UMLS:C0035222 {source="MONDO:equivalentTo", source="NCIT:C3353", source="DOID:11394"}
is_a: MONDO:0006502 ! acute respiratory distress syndrome
created_by: http://orcid.org/0000-0001-5208-3432

[Term]
id: MONDO:0100131
name: pediatric acute respiratory distress syndrome
def: "Acute respiratory distress syndromet that occurs in pediatric patients and includes findings of new infiltrates (unilateral or bilateral) consistent with acute parenchymal disease, edema not fully explained by fluid overload or cardiac failure, and may present as new acute lung disease in setting of chronic lung disease and/or heart disease, and perinatal lung disease is excluded." [PMID:25647235, PMID:31236307]
synonym: "PARDS" EXACT [PMID:25647235, PMID:31236307]
is_a: MONDO:0006502 ! acute respiratory distress syndrome
created_by: http://orcid.org/0000-0001-5208-3432

[Term]
id: MONDO:0200000
name: uterine ligament adenosarcoma
Expand Down

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