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Get stage directly from GDC, get data provenance #91

Merged
merged 16 commits into from
Jan 21, 2025
Merged

Get stage directly from GDC, get data provenance #91

merged 16 commits into from
Jan 21, 2025

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msierk
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@msierk msierk commented Jun 25, 2024

Changes to cda_table_importer and cda_disease_factory to account for having to get stage from GDC directly. Changed fetch_rows command to use 'provenance=True' to get source (GDC,PDC,IDC,CDS). Also changed GET to POST to speed things up when querying GDC API. Haven't fully confirmed that the merging of tables with provenance is working properly.

to account for having to get stage from GDC directly.  Also changed GET to POST
to speed things up.
@msierk msierk changed the title Changes to cda_table_importer and cda_disease_factory Get stage directly from GDC, get data provenance Jun 25, 2024
@msierk msierk marked this pull request as ready for review November 26, 2024 15:28
@msierk msierk merged commit 2482477 into develop Jan 21, 2025
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@msierk msierk deleted the fix_stage branch January 21, 2025 16:05
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