Hotfix to import statement for StudyAccess.

nadeemlab · Sep 15, 2023 · 0bf5713 · 0bf5713
1 parent dd93f8d
commit 0bf5713
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Showing 2 changed files with 4 additions and 1 deletion.
diff --git a/spatialprofilingtoolbox/ondemand/service_client.py b/spatialprofilingtoolbox/ondemand/service_client.py
@@ -12,7 +12,9 @@
     CompositePhenotype,
     UnivariateMetricsComputationResult,
 )
+from spatialprofilingtoolbox.standalone_utilities.log_formats import colorized_logger
 
+logger = colorized_logger(__name__)
 
 class OnDemandRequester:
     """TCP client for requesting from the on-demand service."""
@@ -175,4 +177,5 @@ def _get_ondemand_host_port(service: str | None = None):
         if host is None or port is None:
             message = 'Specify ONDEMAND_HOST and ONDEMAND_PORT or else a specific service variant.'
             raise EnvironmentError(message)
+        logger.debug('Host and port (with service "%s"): %s', service, (host, port))
         return (host, port)
diff --git a/spatialprofilingtoolbox/workflow/common/sparse_matrix_puller.py b/spatialprofilingtoolbox/workflow/common/sparse_matrix_puller.py
@@ -7,7 +7,7 @@
 from psycopg2.extensions import cursor as Psycopg2Cursor
 
 from spatialprofilingtoolbox.db.expressions_table_indexer import ExpressionsTableIndexer
-from spatialprofilingtoolbox.db.study_access import StudyAccess
+from spatialprofilingtoolbox.db.accessors.study import StudyAccess
 from spatialprofilingtoolbox.workflow.common.logging.fractional_progress_reporter \
     import FractionalProgressReporter
 from spatialprofilingtoolbox.standalone_utilities.log_formats import colorized_logger