v0.1.5

Changes

• Table output is default in modkit summary, columns are all_counts/frac and pass_counts/frac instead of counts/frac and filt_counts/frac. See help for details.

Fixes

• The modkit summary command will not use all of the reads in the input modBAM when the --no-filtering flag is used. To disable sampling (and use all of the reads) use --no-sampling. See docs for details.

Adds

• The sample-probs command will now output histograms of the base modification probabilities with the --hist option.
• "Book-style" docs.