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Feature/issue 7 create working docker image #23

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merged 3 commits into from
Oct 10, 2023
Merged

Feature/issue 7 create working docker image #23

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9806a5a
updated docker file and removed hdf5
Oct 5, 2023
1019a59
updated docker path and installed poetry
Oct 6, 2023
90fb263
updated docker file to include poetry installation as root
Oct 10, 2023
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21 changes: 16 additions & 5 deletions docker/Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -5,11 +5,12 @@ RUN apt-get update \
&& DEBIAN_FRONTEND=noninteractive apt-get upgrade -y \
gcc \
libnetcdf-dev \
libhdf5-dev \
hdf5-helpers \
#libhdf5-dev \
#hdf5-helpers \
&& pip3 install --upgrade pip \
&& pip3 install cython \
&& apt-get clean
&& apt-get clean \
&& pip3 install poetry

# Create a new user
RUN adduser --quiet --disabled-password --shell /bin/sh --home /home/dockeruser --gecos "" --uid 1000 dockeruser
Expand All @@ -27,13 +28,23 @@ ARG DIST_PATH

USER root
RUN mkdir -p /worker && chown dockeruser /worker
COPY ../pyproject.toml /worker
USER dockeruser

WORKDIR /worker

ENV PYTHONPATH=${PYTHONPATH}:${PWD}

COPY --chown=dockeruser $DIST_PATH $DIST_PATH
USER dockeruser
RUN pip3 install --no-cache-dir --force --user --index-url https://pypi.org/simple/ --extra-index-url https://test.pypi.org/simple/ $SOURCE \
&& rm -rf $DIST_PATH
#RUN pip3 install --no-cache-dir --force --user --index-url https://pypi.org/simple/ --extra-index-url https://test.pypi.org/simple/ $SOURCE \
# && rm -rf $DIST_PATH

#install poetry as root
USER root
RUN poetry config virtualenvs.create false
RUN poetry install --no-dev

USER dockeruser
# Run the Batchee Harmony service
ENTRYPOINT ["batchee_harmony"]