folder structure consistency

Google Cloud Platform/RStudioServerUbuntuGCP.txt → google-cloud-platform/RStudioServerUbuntuGCP.txt

@@ -1,139 +1,139 @@
-Setting up a RStudio Server running Ubuntu on GCP
-
-9/12/23
-
-
-========================================================================================================================
-
-1. Creating a VM instance
-
-Navigate to your project
-Click on compute engine
-VM instances
-CREATE INSTANCE
-Set the Region and Zone to one that is close to you - make note of the region and zone, they will be important later on
-Set the Series and Machine Type
-Change Boot disk OS to Ubuntu 22.04 LTS x86/64
-Click Allow HTTP and HTTPS traffic
-Click Create
-
-2. Create port in firewall to allow access to VM
-Navigate to Network Security
-click on firewall policies
-Create Firewall Rule
-Name: rstudio
-Target Tags*: http-server
-Source IPv4 ranges" 0.0.0.0/0
-Protocols and Ports
-Check TCP and enter: 8787
-Click Create
-
-
-
-========================================================================================================================
-
-2. Install dependencies and RStudio Server
-
-Navigate to your project
-Navigate to the VM instances page
-Open a terminal by selecting the SSH button on the VM you created
-Enter the following into the terminal:
-	1. update packages
-	sudo apt-get update -y && sudo apt-get upgrade -y
-	
-	2. Install required dependencies
-	sudo apt-get install gdebi-core
-	
-	3. Install base R
-	sudo apt -y install r-base r-base-dev
-
-	4. Install reauired dependencies for tidyverse
-	sudo apt-get install libcurl4-openssl-dev libssl-dev libxml2-dev libfontconfig1-dev
-
-	5. Install reauired dependencies for spatial libraries
-	sudo apt-get install libudunits2-dev libgdal-dev libgeos-dev libproj-dev libmysqlclient-dev libjq-dev libprotobuf-dev protobuf-compiler -y
-
-	6. Install RStudio Server
-	wget https://download2.rstudio.org/server/jammy/amd64/rstudio-server-2023.06.2-561-amd64.deb
-	sudo gdebi rstudio-server-2023.06.2-561-amd64.deb
-
-	7. Create a new user and password
-	sudo adduser master
-	New password: master
-	Retype new password: master
-	Press ENTER for default on all other values
-
-	8. Reboot
-	sudo reboot
-
- EXIT the SSH in browser
-
-========================================================================================================================
-
-3. Setting up GCS Fuse to mount storage buckets as a vm drive
-
-
-Navigate to the VM instances page
-Open a terminal by selecting SSH on the VM you created
-Enter the following into the terminal:
-
-	export GCSFUSE_REPO=gcsfuse-`lsb_release -c -s`
-
-	echo "deb https://packages.cloud.google.com/apt $GCSFUSE_REPO main" | sudo tee /etc/apt/sources.list.d/gcsfuse.list
-
-	curl https://packages.cloud.google.com/apt/doc/apt-key.gpg | sudo apt-key add -
-
-	sudo apt-get update
-
-	sudo apt-get install gcsfuse
-
-EXIT the SSH in browser
-Stop the VM instance by checking the box and selecting STOP
-Click on the activate cloud shell button located on the upper right hand side of the page next to the notifications and support buttons
-From the cloud shell change the permissions to give vm access to buckets change the machine name and zone to match yours:
- 
-	gcloud beta compute instances set-scopes rstudio-template --scopes=storage-full --zone=us-west4-a
-
-When Prompted click on AUTHORIZE
-Close the cloud shell by clicking on the X in the upper right hand corner
-Start the VM instance by checing the box and selecting START
-
-Navigate to the storage bucket you want to connect to the VM
-Copy the name of the bucket.
-
-
-Navigate to the VM instances page
-Open a terminal by selecting SSH on the VM you created
-Enter the following into the terminal (be sure to put the copied name of the bucket where it says name-of-bucket):
-
-	1. get the uid (enter your username where it says master)
-	id -u master
-
-	2. get the gid (enter your username where is says master)
-	id - g master
-
-	3. create directories
-	sudo mkdir -p /mnt/name-of-bucket
-
-	4. change to allow write permissions
-	sudo chmod a+w /mnt/name-of-bucket
-
-
-	5. open up and edit the fstab document
-	sudo nano /etc/fstab
-
-	#paste these into the editor on new lines (enter the uid and gid from steps 1 and 2 above)
-	name-of-bucket /mnt/name-of-bucket gcsfuse rw,_netdev,allow_other,uid=1002,gid=1003,file_mode=0776,dir_mode=0776
-	
-	6. ctrl o will write to the file, then press enter, then ctrl x to exit
-
-	7. sudo reboot
-========================================================================================================================
-
-4. Connecting to your Ubuntu desktop VM
-
-Navigate to the VM instances page
-Copy the external IP to the clipboard
-Open a new browser tab
-Paste the ip address into the browser followed by :8787 it should look like the following: 11.111.111.111:8787
-Log in using your username and password
+Setting up a RStudio Server running Ubuntu on GCP
+
+9/12/23
+
+
+========================================================================================================================
+
+1. Creating a VM instance
+
+Navigate to your project
+Click on compute engine
+VM instances
+CREATE INSTANCE
+Set the Region and Zone to one that is close to you - make note of the region and zone, they will be important later on
+Set the Series and Machine Type
+Change Boot disk OS to Ubuntu 22.04 LTS x86/64
+Click Allow HTTP and HTTPS traffic
+Click Create
+
+2. Create port in firewall to allow access to VM
+Navigate to Network Security
+click on firewall policies
+Create Firewall Rule
+Name: rstudio
+Target Tags*: http-server
+Source IPv4 ranges" 0.0.0.0/0
+Protocols and Ports
+Check TCP and enter: 8787
+Click Create
+
+
+
+========================================================================================================================
+
+2. Install dependencies and RStudio Server
+
+Navigate to your project
+Navigate to the VM instances page
+Open a terminal by selecting the SSH button on the VM you created
+Enter the following into the terminal:
+	1. update packages
+	sudo apt-get update -y && sudo apt-get upgrade -y
+
+	2. Install required dependencies
+	sudo apt-get install gdebi-core
+
+	3. Install base R
+	sudo apt -y install r-base r-base-dev
+
+	4. Install reauired dependencies for tidyverse
+	sudo apt-get install libcurl4-openssl-dev libssl-dev libxml2-dev libfontconfig1-dev
+
+	5. Install reauired dependencies for spatial libraries
+	sudo apt-get install libudunits2-dev libgdal-dev libgeos-dev libproj-dev libmysqlclient-dev libjq-dev libprotobuf-dev protobuf-compiler -y
+
+	6. Install RStudio Server
+	wget https://download2.rstudio.org/server/jammy/amd64/rstudio-server-2023.06.2-561-amd64.deb
+	sudo gdebi rstudio-server-2023.06.2-561-amd64.deb
+
+	7. Create a new user and password
+	sudo adduser master
+	New password: master
+	Retype new password: master
+	Press ENTER for default on all other values
+
+	8. Reboot
+	sudo reboot
+
+ EXIT the SSH in browser
+
+========================================================================================================================
+
+3. Setting up GCS Fuse to mount storage buckets as a vm drive
+
+
+Navigate to the VM instances page
+Open a terminal by selecting SSH on the VM you created
+Enter the following into the terminal:
+
+	export GCSFUSE_REPO=gcsfuse-`lsb_release -c -s`
+
+	echo "deb https://packages.cloud.google.com/apt $GCSFUSE_REPO main" | sudo tee /etc/apt/sources.list.d/gcsfuse.list
+
+	curl https://packages.cloud.google.com/apt/doc/apt-key.gpg | sudo apt-key add -
+
+	sudo apt-get update
+
+	sudo apt-get install gcsfuse
+
+EXIT the SSH in browser
+Stop the VM instance by checking the box and selecting STOP
+Click on the activate cloud shell button located on the upper right hand side of the page next to the notifications and support buttons
+From the cloud shell change the permissions to give vm access to buckets change the machine name and zone to match yours:
+
+	gcloud beta compute instances set-scopes rstudio-template --scopes=storage-full --zone=us-west4-a
+
+When Prompted click on AUTHORIZE
+Close the cloud shell by clicking on the X in the upper right hand corner
+Start the VM instance by checing the box and selecting START
+
+Navigate to the storage bucket you want to connect to the VM
+Copy the name of the bucket.
+
+
+Navigate to the VM instances page
+Open a terminal by selecting SSH on the VM you created
+Enter the following into the terminal (be sure to put the copied name of the bucket where it says name-of-bucket):
+
+	1. get the uid (enter your username where it says master)
+	id -u master
+
+	2. get the gid (enter your username where is says master)
+	id - g master
+
+	3. create directories
+	sudo mkdir -p /mnt/name-of-bucket
+
+	4. change to allow write permissions
+	sudo chmod a+w /mnt/name-of-bucket
+
+
+	5. open up and edit the fstab document
+	sudo nano /etc/fstab
+
+	#paste these into the editor on new lines (enter the uid and gid from steps 1 and 2 above)
+	name-of-bucket /mnt/name-of-bucket gcsfuse rw,_netdev,allow_other,uid=1002,gid=1003,file_mode=0776,dir_mode=0776
+
+	6. ctrl o will write to the file, then press enter, then ctrl x to exit
+
+	7. sudo reboot
+========================================================================================================================
+
+4. Connecting to your Ubuntu desktop VM
+
+Navigate to the VM instances page
+Copy the external IP to the clipboard
+Open a new browser tab
+Paste the ip address into the browser followed by :8787 it should look like the following: 11.111.111.111:8787
+Log in using your username and password