bump book

Part1/packages.bib

@@ -1,3 +1,11 @@
+@Manual{R-aqp,
+  title = {aqp: Algorithms for Quantitative Pedology},
+  author = {Dylan Beaudette and Pierre Roudier and Andrew Brown},
+  note = {R package version 2.1.0},
+  url = {https://github.com/ncss-tech/aqp},
+  year = {2025},
+}
+
 @Manual{R-base,
   title = {R: A Language and Environment for Statistical Computing},
   author = {{R Core Team}},
@@ -15,6 +23,31 @@ @Manual{R-bookdown
   url = {https://github.com/rstudio/bookdown},
 }
 
+@Manual{R-diagram,
+  title = {diagram: Functions for Visualising Simple Graphs (Networks), Plotting
+Flow Diagrams},
+  author = {Karline Soetaert},
+  year = {2020},
+  note = {R package version 1.6.5},
+  url = {https://CRAN.R-project.org/package=diagram},
+}
+
+@Manual{R-dplyr,
+  title = {dplyr: A Grammar of Data Manipulation},
+  author = {Hadley Wickham and Romain François and Lionel Henry and Kirill Müller and Davis Vaughan},
+  year = {2023},
+  note = {R package version 1.1.4},
+  url = {https://dplyr.tidyverse.org},
+}
+
+@Manual{R-ggplot2,
+  title = {ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics},
+  author = {Hadley Wickham and Winston Chang and Lionel Henry and Thomas Lin Pedersen and Kohske Takahashi and Claus Wilke and Kara Woo and Hiroaki Yutani and Dewey Dunnington and Teun {van den Brand}},
+  year = {2024},
+  note = {R package version 3.5.1},
+  url = {https://ggplot2.tidyverse.org},
+}
+
 @Manual{R-knitr,
   title = {knitr: A General-Purpose Package for Dynamic Report Generation in R},
   author = {Yihui Xie},
@@ -31,6 +64,32 @@ @Manual{R-rmarkdown
   url = {https://github.com/rstudio/rmarkdown},
 }
 
+@Manual{R-shape,
+  title = {shape: Functions for Plotting Graphical Shapes, Colors},
+  author = {Karline Soetaert},
+  year = {2024},
+  note = {R package version 1.4.6.1},
+  url = {https://CRAN.R-project.org/package=shape},
+}
+
+@Manual{R-soilDB,
+  title = {soilDB: Soil Database Interface},
+  author = {Dylan Beaudette and Jay Skovlin and Stephen Roecker and Andrew Brown},
+  note = {R package version 2.8.7},
+  url = {https://github.com/ncss-tech/soilDB/},
+  year = {2025},
+}
+
+@Article{aqp2013,
+  title = {Algorithms for quantitative pedology: A toolkit for soil scientists},
+  author = {{Beaudette} and {D.E.} and {Roudier} and {P.} and {O'Geen} and {A.T.}},
+  journal = {Computers \& Geosciences},
+  year = {2013},
+  volume = {52},
+  pages = {258-268},
+  url = {http://dx.doi.org/10.1016/j.cageo.2012.10.020},
+}
+
 @Book{bookdown2016,
   title = {bookdown: Authoring Books and Technical Documents with {R} Markdown},
   author = {Yihui Xie},
@@ -41,6 +100,15 @@ @Book{bookdown2016
   url = {https://bookdown.org/yihui/bookdown},
 }
 
+@Book{ggplot22016,
+  author = {Hadley Wickham},
+  title = {ggplot2: Elegant Graphics for Data Analysis},
+  publisher = {Springer-Verlag New York},
+  year = {2016},
+  isbn = {978-3-319-24277-4},
+  url = {https://ggplot2.tidyverse.org},
+}
+
 @Book{knitr2015,
   title = {Dynamic Documents with {R} and knitr},
   author = {Yihui Xie},

book/404.html

@@ -23,7 +23,7 @@
 <meta name="author" content="Soil Survey Staff" />
 
 
-<meta name="date" content="2025-01-16" />
+<meta name="date" content="2025-01-17" />
 
   <meta name="viewport" content="width=device-width, initial-scale=1" />
   <meta name="apple-mobile-web-app-capable" content="yes" />
@@ -415,7 +415,7 @@
 <li class="chapter" data-level="4.17.1" data-path="spatial.html"><a href="spatial.html#raster-summary-by-point-nasis-pedon-locations"><i class="fa fa-check"></i><b>4.17.1</b> Raster Summary By Point: NASIS Pedon Locations</a></li>
 <li class="chapter" data-level="4.17.2" data-path="spatial.html"><a href="spatial.html#raster-summary-by-polygon-series-extent"><i class="fa fa-check"></i><b>4.17.2</b> Raster Summary By Polygon: Series Extent</a></li>
 <li class="chapter" data-level="4.17.3" data-path="spatial.html"><a href="spatial.html#raster-summary-by-polygon-mlra"><i class="fa fa-check"></i><b>4.17.3</b> Raster Summary By Polygon: MLRA</a></li>
-<li class="chapter" data-level="4.17.4" data-path="spatial.html"><a href="spatial.html#example-faster-with-exactextractr"><i class="fa fa-check"></i><b>4.17.4</b> Example: Faster with <code>exactextractr</code></a></li>
+<li class="chapter" data-level="4.17.4" data-path="spatial.html"><a href="spatial.html#zonal-statistics-with-exactextractr"><i class="fa fa-check"></i><b>4.17.4</b> Zonal Statistics with <code>exactextractr</code></a></li>
 <li class="chapter" data-level="4.17.5" data-path="spatial.html"><a href="spatial.html#example-summarizing-mlra-raster-data-with-lattice-graphics"><i class="fa fa-check"></i><b>4.17.5</b> Example: Summarizing MLRA Raster Data with <code>lattice</code> graphics</a></li>
 </ul></li>
 <li class="chapter" data-level="4.18" data-path="spatial.html"><a href="spatial.html#additional-reading-spatial"><i class="fa fa-check"></i><b>4.18</b> Additional Reading (Spatial)</a></li>