Merge pull request #431 from neurodata/staging

v 0.0.4

.circleci/config.yml

@@ -0,0 +1,133 @@
+version: 2.1
+
+orbs:
+  codecov: codecov/[email protected]
+
+jobs:
+  build:
+    parameters:
+      version:
+        type: string
+    docker:
+      - image: cimg/python:<< parameters.version >>
+    steps:
+      - checkout
+      - restore_cache:
+          key: v1-<< parameters.version >>-min-dependency-cache-{{ checksum "dev-requirements.txt" }}
+      - run:
+          name: install python dependencies
+          command: |
+            python3 -m venv venv
+            . venv/bin/activate
+            pip install --upgrade pip
+            pip install -r dev-requirements.txt
+      - save_cache:
+          key: v1-<< parameters.version >>-min-dependency-cache-{{ checksum "dev-requirements.txt" }}
+          paths:
+            - "venv"
+      - run:
+          name: test if package installs
+          command: |
+            . venv/bin/activate
+            python3 setup.py install
+  test-module:
+    parameters:
+      module:
+        type: string
+    docker:
+      - image: cimg/python:3.8
+    steps:
+      - checkout
+      - restore_cache:
+          key: v1-3.8-dependency-cache-{{ checksum "dev-requirements.txt" }}
+      - run:
+          name: install python dependencies
+          command: |
+            python3 -m venv venv
+            . venv/bin/activate
+            pip install -r dev-requirements.txt
+            pip install -e .
+      - save_cache:
+          key: v1-3.8-dependency-cache-{{ checksum "dev-requirements.txt" }}
+          paths:
+            - "venv"
+      - run:
+          name: run code linting
+          command: |
+            . venv/bin/activate
+            black --check --diff ./<< parameters.module >>
+      - run:
+          name: run tests and coverage
+          command: |
+            . venv/bin/activate
+            pytest --junitxml=test-reports/junit.xml --cov-report=xml --cov=./<< parameters.module >> ./<< parameters.module >>
+      - store_test_results:
+          path: test-reports
+      - store_artifacts:
+          path: test-reports
+      - codecov/upload:
+          file: "coverage.xml"
+  deploy:
+    docker:
+      - image: cimg/python:3.8
+    steps:
+      - checkout
+      - restore_cache:
+          key: v1-3.8-dependency-cache-{{ checksum "dev-requirements.txt" }}
+      - run:
+          name: install python dependencies
+          command: |
+            python3 -m venv venv
+            . venv/bin/activate
+            pip install -r dev-requirements.txt
+            pip install -e .
+      - save_cache:
+          key: v1-3.8-dependency-cache-{{ checksum "dev-requirements.txt" }}
+          paths:
+            - "venv"
+      - run:
+          name: verify git tag vs. version
+          command: |
+            python3 -m venv venv
+            . venv/bin/activate
+            python setup.py verify
+      - run:
+          name: init .pypirc
+          command: |
+            echo -e "[pypi]" >> ~/.pypirc
+            echo -e "username = $PYPI_USERNAME" >> ~/.pypirc
+            echo -e "password = $PYPI_PASSWORD" >> ~/.pypirc
+      - run:
+          name: create packages
+          command: |
+            python setup.py sdist
+      - run:
+          name: upload to pypi
+          command: |
+            . venv/bin/activate
+            twine upload dist/*
+workflows:
+  build-test-deploy:
+    jobs:
+      - build:
+          name: "v3.6"
+          version: "3.6"
+      - build:
+          name: "v3.7"
+          version: "3.7"
+      - build:
+          name: "v3.8"
+          version: "3.8"
+      - test-module:
+          name: "proglearn"
+          module: "proglearn"
+          requires:
+            - "v3.8"
+      - deploy:
+          requires:
+            - "proglearn"
+          filters:
+            tags:
+              only: /[0-9]+(\.[0-9]+)*/
+            branches:
+              ignore: /.*/

README.md

@@ -1,6 +1,7 @@
 # ProgLearn
 
-[![Build Status](https://travis-ci.org/neurodata/ProgLearn.svg?branch=main)](https://travis-ci.org/neurodata/ProgLearn)
+[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.4276573.svg)](https://doi.org/10.5281/zenodo.4276573)
+[![Build Status](https://circleci.com/gh/neurodata/ProgLearn/tree/main.svg?style=shield&circle-token=:circle-token)](https://app.circleci.com/pipelines/github/neurodata/ProgLearn)
 [![Codecov](https://codecov.io/gh/neurodata/ProgLearn/branches/main/graph/badge.svg)](https://codecov.io/gh/neurodata/ProgLearn)
 [![PyPI version](https://img.shields.io/pypi/v/proglearn.svg)](https://pypi.org/project/proglearn/)
 [![arXiv](https://img.shields.io/badge/arXiv-2004.12908-red.svg?style=flat)](https://arxiv.org/abs/2004.12908)