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Add pattern to input field #832

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Feb 19, 2025
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1 change: 1 addition & 0 deletions CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -30,6 +30,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

- [#800](https://github.com/nf-core/ampliseq/pull/800) - Fixed SH files for UNITE9.0, they were missing some entries due to a bug caused by API update in PlutoF
- [#808](https://github.com/nf-core/ampliseq/pull/808) - Add missing library declaration in R script.
- [#832](https://github.com/nf-core/ampliseq/pull/832) - Add pattern to input field

### `Dependencies`

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1 change: 1 addition & 0 deletions nextflow_schema.json
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Expand Up @@ -15,6 +15,7 @@
"type": "string",
"format": "file-path",
"mimetype": "text/tsv",
"pattern": "^\\S+\\.(tsv|csv|yml|yaml|txt)$",
"fa_icon": "fas fa-dna",
"description": "Path to tab-separated sample sheet",
"help_text": "Path to sample sheet, either tab-separated (.tsv), comma-separated (.csv), or in YAML format (.yml/.yaml), that points to compressed fastq files.\n\nThe sample sheet must have two to four tab-separated columns/entries with the following headers: \n- `sampleID` (required): Unique sample IDs, must start with a letter, and can only contain letters, numbers or underscores\n- `forwardReads` (required): Paths to (forward) reads zipped FastQ files\n- `reverseReads` (optional): Paths to reverse reads zipped FastQ files, required if the data is paired-end\n- `run` (optional): If the data was produced by multiple sequencing runs, any string\n\nRelated parameters are:\n- `--pacbio` and `--iontorrent` if the sequencing data is PacBio data or IonTorrent data (default expected: paired-end Illumina data)\n- `--single_end` if the sequencing data is single-ended Illumina data (default expected: paired-end Illumina data)\n- Choose an appropriate reference taxonomy for the type of amplicon (16S/18S/ITS/CO1) (default: DADA2 assignTaxonomy and 16S rRNA sequence database)",
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