Nextflow stdout:

ERROR ~ Error executing process > 'NFCORE_AMPLISEQ:AMPLISEQ:RENAME_RAW_DATA_FILES (sampleID_2)'

Caused by:
  Directive `process.shell` cannot contain new-line characters - offending value: [bash
  
  set -e # Exit if a tool returns a non-zero status/exit code
  set -u # Treat unset variables and parameters as an error
  set -o pipefail # Returns the status of the last command to exit with a non-zero status or zero if all successfully execute
  set -C # No clobber - prevent output redirection from overwriting files.
  ]



 -- Check '/home/runner/work/ampliseq/ampliseq/.nf-test/tests/c109527dc54db1247070e58b1c6bb28b/meta/nextflow.log' file for details
ERROR ~ Pipeline failed. Please refer to troubleshooting docs: https://nf-co.re/docs/usage/troubleshooting

 -- Check '/home/runner/work/ampliseq/ampliseq/.nf-test/tests/c109527dc54db1247070e58b1c6bb28b/meta/nextflow.log' file for details
Nextflow stderr: