Collect fix -> Pipeline works again with all samples. Not only first …

…sample
nf-core · Jun 26, 2023 · 7dcbbac · 7dcbbac
1 parent 09bdf9a
commit 7dcbbac
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/workflows/circdna.nf b/workflows/circdna.nf
@@ -23,7 +23,7 @@ if (!(params.input_format == "FASTQ" | params.input_format == "BAM")) {
 }
 
 // Modify fasta channel to include meta data
-ch_fasta_meta = ch_fasta.map{ it -> [[id:it[0].baseName], it] }
+ch_fasta_meta = ch_fasta.map{ it -> [[id:it[0].baseName], it] }.collect()
 
 branch = params.circle_identifier.split(",")
 run_circexplorer2 = ("circexplorer2" in branch)