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Close user-tagged issues and PRs Close user-tagged issues and PRs #3: Scheduled
November 17, 2024 00:13 12s dev
dev
November 17, 2024 00:13 12s
Close user-tagged issues and PRs Close user-tagged issues and PRs #2: Scheduled
November 10, 2024 00:12 14s dev
dev
November 10, 2024 00:12 14s
DOWNLOAD_ASSEMBLIES error Fix linting from a comment #128: Issue comment #25 (comment) created by zachary-foster
November 7, 2024 18:52 1s
November 7, 2024 18:52 1s
picard error - can't find the command Fix linting from a comment #127: Issue comment #26 (comment) created by zachary-foster
November 7, 2024 18:52 2s
November 7, 2024 18:52 2s
Add modules to capture available workflow metadata to pass on to the report Fix linting from a comment #126: Issue comment #32 (comment) created by zachary-foster
November 7, 2024 18:51 3s
November 7, 2024 18:51 3s
If Spades or Bakta fail for small number of samples, is there a way to proceed without these samples? Fix linting from a comment #125: Issue comment #51 (comment) created by zachary-foster
November 7, 2024 18:50 2s
November 7, 2024 18:50 2s
Add input column to define type of nanopore/pacbio sequencing Fix linting from a comment #124: Issue comment #55 (comment) created by zachary-foster
November 7, 2024 18:48 2s
November 7, 2024 18:48 2s
Variant calling uses alternate reference but retains user-defined reference id Fix linting from a comment #123: Issue comment #60 (comment) created by zachary-foster
November 7, 2024 18:47 1s
November 7, 2024 18:47 1s
Check if type strains are being chosen for references Fix linting from a comment #122: Issue comment #61 (comment) created by zachary-foster
November 7, 2024 18:47 3s
November 7, 2024 18:47 3s
BUSCO graphs for assembled genomes Fix linting from a comment #121: Issue comment #77 (comment) created by zachary-foster
November 7, 2024 18:46 2s
November 7, 2024 18:46 2s
read2tree issue on mixed dataset Fix linting from a comment #120: Issue comment #82 (comment) created by zachary-foster
November 7, 2024 18:43 2s
November 7, 2024 18:43 2s
Large and complex test data set Fix linting from a comment #119: Issue comment #92 (comment) created by zachary-foster
November 7, 2024 18:43 2s
November 7, 2024 18:43 2s
assign_mapping_reference not being cached Fix linting from a comment #118: Issue comment #98 (comment) created by zachary-foster
November 7, 2024 18:42 2s
November 7, 2024 18:42 2s
FASTP error: input files don't contain identical amount of reads Fix linting from a comment #117: Issue comment #110 (comment) created by zachary-foster
November 7, 2024 18:38 2s
November 7, 2024 18:38 2s
Sometimes "find_assemblies" returns an empty table without an error Fix linting from a comment #116: Issue comment #112 (comment) created by zachary-foster
November 7, 2024 18:37 2s
November 7, 2024 18:37 2s
Out of date spades may be causing errors with assemblies Fix linting from a comment #115: Issue comment #109 (comment) created by cahuparo
November 5, 2024 20:09 2s
November 5, 2024 20:09 2s
FASTP error: input files don't contain identical amount of reads Fix linting from a comment #114: Issue comment #110 (comment) created by cahuparo
November 5, 2024 20:04 2s
November 5, 2024 20:04 2s
Out of date spades may be causing errors with assemblies Fix linting from a comment #113: Issue comment #109 (comment) created by zachary-foster
November 5, 2024 19:26 2s
November 5, 2024 19:26 2s
FASTP error: input files don't contain identical amount of reads Fix linting from a comment #112: Issue comment #110 (comment) created by zachary-foster
November 5, 2024 18:10 2s
November 5, 2024 18:10 2s
Close user-tagged issues and PRs Close user-tagged issues and PRs #1: Scheduled
November 3, 2024 00:13 13s dev
dev
November 3, 2024 00:13 13s
Error when testing xanthomonas small dataset Fix linting from a comment #111: Issue comment #81 (comment) created by zachary-foster
October 31, 2024 23:53 2s
October 31, 2024 23:53 2s
Error rendering report when I don't have core gene phylogeny (eukaryote dataset) Fix linting from a comment #110: Issue comment #89 (comment) created by zachary-foster
October 31, 2024 23:51 2s
October 31, 2024 23:51 2s
Make DOWNLOAD_ASSEMBLIES store data more effeciently Fix linting from a comment #109: Issue comment #78 (comment) created by zachary-foster
October 31, 2024 18:54 2s
October 31, 2024 18:54 2s
When all samples have only exclusive user-defined references. the pipeline breaks Fix linting from a comment #108: Issue comment #101 (comment) created by zachary-foster
October 31, 2024 18:53 2s
October 31, 2024 18:53 2s
nf-core linting comment nf-core linting comment #381: completed by zachary-foster
October 30, 2024 23:27 18s
October 30, 2024 23:27 18s