Escape properly bash command

nf-core · Sep 29, 2023 · 6d71c38 · 6d71c38
1 parent 59d43d9
commit 6d71c38
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/modules/local/download_pdbmmcif.nf b/modules/local/download_pdbmmcif.nf
@@ -41,7 +41,7 @@ process DOWNLOAD_PDBMMCIF {
         raw
 
     echo "Unzipping all mmCIF files..."
-    find ./raw -type f -name '*.[gG][zZ]' -print0 | while IFS= read -r -d $'\0' file; do
+    find ./raw -type f -name '*.[gG][zZ]' -print0 | while IFS= read -r -d \$'\\0' file; do
         gunzip "$file"
     done