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FelixKrueger committed Nov 2, 2024
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Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion workflows/scrnaseq.nf
Original file line number Diff line number Diff line change
Expand Up @@ -37,7 +37,7 @@ workflow SCRNASEQ {
error "Only cellranger supports `protocol = 'auto'`. Please specify the protocol manually!"
}

// collecting paths from genome attributes (optional)
// collect paths from genome attributes file (e.g. iGenomes.config; optional)
params.fasta = getGenomeAttribute('fasta')
params.gtf = getGenomeAttribute('gtf')
params.star_index = getGenomeAttribute('star')
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