ENH: Avoid blocking thread on certain requests #209
Workflow file for this run
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| name: build-test | |
| on: | |
| push: | |
| branches: | |
| - main | |
| tags: | |
| - '*' | |
| pull_request: | |
| branches: | |
| - main | |
| schedule: | |
| # 7am EST / 8am EDT Mondays | |
| - cron: '0 12 * * 1' | |
| defaults: | |
| run: | |
| shell: bash | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python 3 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3 | |
| - name: Check python version and install build | |
| run: python --version | |
| - name: Build migas | |
| run: pipx run build | |
| - name: Check distributions | |
| run: pipx run twine check dist/* | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: dist | |
| path: dist/ | |
| test: | |
| needs: build | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ['3.9', '3.10', '3.11', '3.12'] | |
| install: [repo] | |
| include: | |
| - python-version: '3.12' | |
| install: sdist | |
| - python-version: '3.12' | |
| install: wheel | |
| - python-version: '3.12' | |
| install: editable | |
| env: | |
| INSTALL_TYPE: ${{ matrix.install }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| if: matrix.install == 'repo' || matrix.install == 'editable' | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: dist | |
| path: dist/ | |
| - name: Select archive | |
| run: | | |
| if [ "$INSTALL_TYPE" = "sdist" ]; then | |
| ARCHIVE=$( ls dist/*.tar.gz ) | |
| elif [ "$INSTALL_TYPE" = "wheel" ]; then | |
| ARCHIVE=$( ls dist/*.whl ) | |
| elif [ "$INSTALL_TYPE" = "repo" ]; then | |
| ARCHIVE="." | |
| elif [ "$INSTALL_TYPE" = "editable" ]; then | |
| ARCHIVE="-e ." | |
| fi | |
| echo "ARCHIVE=$ARCHIVE" >> $GITHUB_ENV | |
| - name: Install package and test dependencies | |
| run: python -m pip install $ARCHIVE[test] | |
| - uses: actions/checkout@v3 | |
| with: | |
| repository: 'nipreps/migas-server' | |
| path: 'migas-server' | |
| - name: Start up local server | |
| run: | | |
| cd migas-server | |
| pip install hatch | |
| make compose-up | |
| env: | |
| MIGAS_BYPASS_RATE_LIMIT: '1' | |
| - name: Verify server is available | |
| run: docker port ${MIGAS_SERVER_NAME} && sleep 10 | |
| env: | |
| MIGAS_SERVER_NAME: app | |
| - name: Run tests | |
| env: | |
| MIGAS_FRESH_DB: '1' | |
| run: python -m pytest -sv --doctest-modules --pyargs migas | |
| - name: Stop local server | |
| run: docker compose -f migas-server/docker-compose.yml down | |
| release: | |
| if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags') | |
| needs: [build, test] | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python 3 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3 | |
| - name: Verify python version | |
| run: python -V | |
| - name: Fetch packaged build | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: dist | |
| path: dist/ | |
| - name: Upload to PyPI if tagged | |
| uses: pypa/gh-action-pypi-publish@release/v1 | |
| with: | |
| user: __token__ | |
| password: ${{ secrets.PYPI_API_TOKEN }} | |
| - name: Create GitHub release from annotated tag | |
| uses: spenserblack/actions-tag-to-release@v3 | |
| with: | |
| prerelease: auto | |
| prerelease-pattern: '*rc*' |