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raymond91125 committed Mar 27, 2020
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Showing 28 changed files with 49,478 additions and 52,126 deletions.
723 changes: 160 additions & 563 deletions imports/ro_import.json
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310 changes: 76 additions & 234 deletions imports/ro_import.obo
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599 changes: 103 additions & 496 deletions imports/ro_import.owl
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723 changes: 160 additions & 563 deletions src/ontology/imports/ro_import.json
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310 changes: 76 additions & 234 deletions src/ontology/imports/ro_import.obo
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599 changes: 103 additions & 496 deletions src/ontology/imports/ro_import.owl
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5 changes: 0 additions & 5 deletions src/ontology/non_native_classes.txt
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Expand Up @@ -3,23 +3,18 @@ http://purl.obolibrary.org/obo/BFO_0000003
http://purl.obolibrary.org/obo/BFO_0000004
http://purl.obolibrary.org/obo/BFO_0000015
http://purl.obolibrary.org/obo/BFO_0000040
http://purl.obolibrary.org/obo/BFO_0000141
http://purl.obolibrary.org/obo/CARO_0000000
http://purl.obolibrary.org/obo/CARO_0000003
http://purl.obolibrary.org/obo/CARO_0000006
http://purl.obolibrary.org/obo/CARO_0000007
http://purl.obolibrary.org/obo/CARO_0000014
http://purl.obolibrary.org/obo/CARO_0030000
http://purl.obolibrary.org/obo/GO_0003674
http://purl.obolibrary.org/obo/GO_0003824
http://purl.obolibrary.org/obo/GO_0004872
http://purl.obolibrary.org/obo/GO_0005634
http://purl.obolibrary.org/obo/GO_0008150
http://purl.obolibrary.org/obo/GO_0016301
http://purl.obolibrary.org/obo/GO_0016740
http://purl.obolibrary.org/obo/GO_0016772
http://purl.obolibrary.org/obo/GO_0044464
http://purl.obolibrary.org/obo/GO_0048018
http://purl.obolibrary.org/obo/RO_0002532
http://purl.obolibrary.org/obo/RO_0002533
http://purl.obolibrary.org/obo/RO_0002577
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11,122 changes: 5,561 additions & 5,561 deletions src/ontology/ontologyterms.txt
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13,185 changes: 6,595 additions & 6,590 deletions src/ontology/reports/basic-report.tsv
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2 changes: 1 addition & 1 deletion src/ontology/reports/class-count-by-prefix.tsv
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@@ -1,2 +1,2 @@
?prefix ?numberOfClasses
"WBbt" 7601
"WBbt" 7606
30,319 changes: 15,168 additions & 15,151 deletions src/ontology/reports/edges.tsv
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19,421 changes: 9,716 additions & 9,705 deletions src/ontology/reports/synonyms.tsv
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185 changes: 93 additions & 92 deletions src/ontology/reports/xrefs.tsv
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@@ -1,93 +1,94 @@
?cls ?xref
<http://purl.obolibrary.org/obo/WBbt_0005189> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005375> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005778> "WBPaper:00038216"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004164> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004212> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0007850> "CARO:0000027"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004214> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004216> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004204> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004134> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004206> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005730> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005309> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0006747> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005729> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005729> "ISBN:0-14-051288-8"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005729> "CARO:0000043"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005298> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004156> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004135> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004170> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004176> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004166> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005830> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004186> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005337> "WBPaper:00038216"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004208> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004136> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005811> "WBPaper:00038216"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005732> "WB:pws"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005732> "CARO:0000040"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005646> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005465> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005734> "WB:pws"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004190> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004140> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004146> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004137> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0003681> "WBPaper:00038216"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0000101> "WB:RYNL"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004139> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005733> "CARO:0000066"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005733> "WB:pws"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0008609> "GO:0030496"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0008628> "CARO:0000014"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005735> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004168> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004141> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004188> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004182> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004138> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005447> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005648> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004192> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004150> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004198> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004148> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004142> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005657> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004183> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005745> "WBPaper:00038216"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0007849> "CARO:0000029"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005471> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005105> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005772> "WBPaper:00038216"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004143> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004184> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005658> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005762> "WBPaper:00038216"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005746> "ISBN:0-14-051288-8"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004152> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004158> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004194> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005756> "WBPaper:00038216"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004144> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005659> "ISBN:0-87969-307-X"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004162> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004210> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005832> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005832> "WB:cgc3760"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005767> "WBPaper:00038216"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005755> "WBPaper:00038216"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0008595> "CARO:0000028"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004202> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004163> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005775> "WBPaper:00038216"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0005364> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0006752> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004196> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004154> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004203> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004133> "WB:rynl"^^<http://www.w3.org/2001/XMLSchema#string>
<http://purl.obolibrary.org/obo/WBbt_0004017> "CL:0000000"
<http://purl.obolibrary.org/obo/WBbt_0004133> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004143> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004170> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004136> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004182> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005657> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005447> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0006747> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005732> "WB:pws"
<http://purl.obolibrary.org/obo/WBbt_0005732> "CARO:0000040"
<http://purl.obolibrary.org/obo/WBbt_0003681> "WBPaper:00038216"
<http://purl.obolibrary.org/obo/WBbt_0005746> "ISBN:0-14-051288-8"
<http://purl.obolibrary.org/obo/WBbt_0004212> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004152> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005830> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005811> "WBPaper:00038216"
<http://purl.obolibrary.org/obo/WBbt_0005762> "WBPaper:00038216"
<http://purl.obolibrary.org/obo/WBbt_0004196> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004203> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005735> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005105> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005298> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004190> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004134> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004192> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004138> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005375> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004146> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004194> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005772> "WBPaper:00038216"
<http://purl.obolibrary.org/obo/WBbt_0004206> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004204> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004183> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004214> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005646> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004137> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004135> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005364> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005733> "WB:pws"
<http://purl.obolibrary.org/obo/WBbt_0005733> "CARO:0000066"
<http://purl.obolibrary.org/obo/WBbt_0007849> "CARO:0000029"
<http://purl.obolibrary.org/obo/WBbt_0004162> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004202> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004154> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004158> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005730> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005832> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005832> "WB:cgc3760"
<http://purl.obolibrary.org/obo/WBbt_0006752> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005729> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005729> "ISBN:0-14-051288-8"
<http://purl.obolibrary.org/obo/WBbt_0005729> "CARO:0000043"
<http://purl.obolibrary.org/obo/WBbt_0004164> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005648> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005745> "WBPaper:00038216"
<http://purl.obolibrary.org/obo/WBbt_0005337> "WBPaper:00038216"
<http://purl.obolibrary.org/obo/WBbt_0004141> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004163> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004156> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004184> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0008628> "CARO:0000014"
<http://purl.obolibrary.org/obo/WBbt_0005658> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004168> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005767> "WBPaper:00038216"
<http://purl.obolibrary.org/obo/WBbt_0005189> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005465> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005659> "ISBN:0-87969-307-X"
<http://purl.obolibrary.org/obo/WBbt_0004208> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004176> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004139> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004198> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005734> "WB:pws"
<http://purl.obolibrary.org/obo/WBbt_0000101> "WB:RYNL"
<http://purl.obolibrary.org/obo/WBbt_0005775> "WBPaper:00038216"
<http://purl.obolibrary.org/obo/WBbt_0004144> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005471> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004140> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004166> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004210> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004142> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0008595> "CARO:0000028"
<http://purl.obolibrary.org/obo/WBbt_0004186> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0004216> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0007850> "CARO:0000027"
<http://purl.obolibrary.org/obo/WBbt_0004148> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005309> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005778> "WBPaper:00038216"
<http://purl.obolibrary.org/obo/WBbt_0005755> "WBPaper:00038216"
<http://purl.obolibrary.org/obo/WBbt_0004188> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0008609> "GO:0030496"
<http://purl.obolibrary.org/obo/WBbt_0004150> "WB:rynl"
<http://purl.obolibrary.org/obo/WBbt_0005756> "WBPaper:00038216"
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