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Add files via upload #52

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41 changes: 24 additions & 17 deletions src/ontology/ddpheno-edit.obo
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Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
format-version: 1.2
date: 25:05:2023 19:03
date: 26:09:2023 13:36
saved-by: pfey
auto-generated-by: OBO-Edit 2.2
default-namespace: Dicty Phenotypes
Expand Down Expand Up @@ -1016,7 +1016,7 @@ def: "Having a relative long stalk." [DDB:pg]
synonym: "long stalk" EXACT []
synonym: "stalky" RELATED []
xref: PATO:0000573
is_a: DDPHENO:0000510 ! aberrant stalk morphogenesis
is_a: DDPHENO:0000510 ! aberrant stalk morphology

[Term]
id: DDPHENO:0000166
Expand Down Expand Up @@ -2552,7 +2552,7 @@ name: decreased stalk length
def: "Having a relative short stalk." [DDB:pg]
synonym: "short stalk" EXACT []
xref: PATO:0000574
is_a: DDPHENO:0000510 ! aberrant stalk morphogenesis
is_a: DDPHENO:0000510 ! aberrant stalk morphology

[Term]
id: DDPHENO:0000384
Expand Down Expand Up @@ -3118,6 +3118,7 @@ is_a: DDPHENO:0000040 ! aberrant response to chemical
id: DDPHENO:0000477
name: aberrant lateral pseudopodium formation
def: "Deviation from the normal, usual, or expected events during lateral pseudopodium formation." [DDB:pf]
comment: GO:0031271.
synonym: "aberrant lateral pseudopodium assembly" EXACT []
is_a: DDPHENO:0001027 ! aberrant pseudopodium formation

Expand Down Expand Up @@ -3242,7 +3243,7 @@ is_obsolete: true
id: DDPHENO:0000497
name: decreased number of vacuoles
def: "Quantitative reduction in vacuoles." [DDB:pg]
is_a: DDPHENO:0001041 ! aberrant vacuole organizationn
is_a: DDPHENO:0001041 ! aberrant vacuole organization

[Term]
id: DDPHENO:0000498
Expand Down Expand Up @@ -3345,7 +3346,7 @@ name: increased stalk width
def: "Having a relative thick stalk." [DDB:pg]
synonym: "thick stalk" EXACT []
xref: PATO:0000599
is_a: DDPHENO:0000510 ! aberrant stalk morphogenesis
is_a: DDPHENO:0000510 ! aberrant stalk morphology

[Term]
id: DDPHENO:0000519
Expand Down Expand Up @@ -3538,7 +3539,7 @@ name: decreased stalk width
def: "Having a relative thin stalk." [DDB:pg]
synonym: "thin stalk" EXACT []
xref: PATO:0000600
is_a: DDPHENO:0000510 ! aberrant stalk morphogenesis
is_a: DDPHENO:0000510 ! aberrant stalk morphology

[Term]
id: DDPHENO:0000550
Expand Down Expand Up @@ -5249,38 +5250,42 @@ creation_date: 2022-12-20T16:28:14Z

[Term]
id: DDPHENO:0000741
name: aberrant protein kinase B signaling
def: "Deviation from the normal, usual, or expected events during protein kinase B signaling." [DDB:pf]
name: aberrant phosphatidylinositol 3-kinase/protein kinase B signal transduction
def: "Deviation from the normal, usual, or expected events during phosphatidylinositol 3-kinase/protein kinase B signal transduction." [DDB:pf]
comment: GO:0043491.
synonym: "aberrant PKB signaling" EXACT []
synonym: "aberrant protein kinase B signaling" EXACT []
is_a: DDPHENO:0001118 ! aberrant signal transduction
created_by: pfey
creation_date: 2022-12-20T16:37:59Z

[Term]
id: DDPHENO:0000742
name: decreased protein kinase B signaling
def: "Reduction in extent, amount, or degree of activation of protein kinase B signaling." [DDB:pf]
name: decreased phosphatidylinositol 3-kinase/protein kinase B signal transduction
def: "Reduction in extent, amount, or degree of activation of phosphatidylinositol 3-kinase/protein kinase B signal transduction." [DDB:pf]
synonym: "decreased PKB signaling" EXACT []
is_a: DDPHENO:0000741 ! aberrant protein kinase B signaling
synonym: "decreased protein kinase B signaling" EXACT []
is_a: DDPHENO:0000741 ! aberrant phosphatidylinositol 3-kinase/protein kinase B signal transduction
created_by: pfey
creation_date: 2022-12-20T16:40:41Z

[Term]
id: DDPHENO:0000743
name: increased protein kinase B signaling
def: "Increase in extent, amount, or degree of protein kinase B signaling." [DDB:pf]
name: increased phosphatidylinositol 3-kinase/protein kinase B signal transduction
def: "Increase in extent, amount, or degree of phosphatidylinositol 3-kinase/protein kinase B signal transduction." [DDB:pf]
synonym: "increased PKB signaling" EXACT []
is_a: DDPHENO:0000741 ! aberrant protein kinase B signaling
synonym: "increased protein kinase B signaling" RELATED []
is_a: DDPHENO:0000741 ! aberrant phosphatidylinositol 3-kinase/protein kinase B signal transduction
created_by: pfey
creation_date: 2022-12-20T16:44:24Z

[Term]
id: DDPHENO:0000744
name: abolished protein kinase B signaling
def: "Complete absence of protein kinase B signaling." [DDB:pf]
name: abolished phosphatidylinositol 3-kinase/protein kinase B signal transduction
def: "Complete absence of phosphatidylinositol 3-kinase/protein kinase B signal transduction." [DDB:pf]
synonym: "abolished PKB signaling" EXACT []
is_a: DDPHENO:0000741 ! aberrant protein kinase B signaling
synonym: "abolished protein kinase B signaling" EXACT []
is_a: DDPHENO:0000741 ! aberrant phosphatidylinositol 3-kinase/protein kinase B signal transduction
created_by: pfey
creation_date: 2022-12-20T16:45:53Z

Expand Down Expand Up @@ -6266,6 +6271,7 @@ is_a: DDPHENO:0001047 ! aberrant transport
id: DDPHENO:0001027
name: aberrant pseudopodium formation
def: "Deviation from the normal, usual, or expected events during pseudopodium formation." [DDB:pg]
comment: GO:0031269.
synonym: "aberrant pseudopodium assembly" EXACT []
is_a: DDPHENO:0001048 ! aberrant cell projection biogenesis

Expand Down Expand Up @@ -9050,6 +9056,7 @@ is_a: DDPHENO:0000513 ! aberrant sporulation
id: DDPHENO:0001433
name: aberrant GABA signaling pathway
def: "Deviation from the normal, usual, or expected events during the gamma-aminobutyric acid signaling pathway." [DDB:pf]
comment: GO:0007214.
synonym: "aberrant gamma-aminobutyric acid signaling pathway" EXACT []
is_a: DDPHENO:0001118 ! aberrant signal transduction

Expand Down
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