ShinySDA (SiSDA)

A shiny app to load and browse SDA objects.

The goal of this app is to make the processing of SDA results including QC and component selection

In this version we use Seurat data structure to store the results and customize their functions for various needs herein.

Refs:

Winston Chang, Joe Cheng, JJ Allaire, Yihui Xie and Jonathan McPherson (2019). shiny: Web Application Framework for R. R package version 1.4.0. https://CRAN.R-project.org/package=shiny

Winston Chang and Barbara Borges Ribeiro (2018). shinydashboard: Create Dashboards with 'Shiny'. R package version 0.7.1. https://CRAN.R-project.org/package=shinydashboard

Daniel Wells and Victoria Hore (2017). SDAtools: SDAtools: A toolkit for SDA. R package version 1.0.

Stuart and Butler et al. Comprehensive integration of single cell data. bioRxiv (2018).

Contact:

Bimber Lab:

@eisamahyari