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sbesson committed Feb 8, 2022
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Expand Up @@ -20,7 +20,7 @@ Abstract: This document contains next-generation file format (NGFF)
Abstract: specifications for storing bioimaging data in the cloud.
Abstract: All specifications are submitted to the https://image.sc community for review.
Status Text: The current released version of this specification is
Status Text: <a href="../0.3/index.html">0.3</a>. Migration scripts
Status Text: <a href="../0.4/index.html">0.4</a>. Migration scripts
Status Text: will be provided between numbered versions. Data written with these latest changes
Status Text: (an "editor's draft") will not necessarily be supported.
</pre>
Expand Down Expand Up @@ -349,7 +349,7 @@ can be found under the "omero" key in the group-level metadata:
```json
"id": 1, # ID in OMERO
"name": "example.tif", # Name as shown in the UI
"version": "0.3", # Current version
"version": "0.4", # Current version
"channels": [ # Array matching the c dimension size
{
"active": true,
Expand Down Expand Up @@ -426,7 +426,7 @@ above).
```json
"image-label":
{
"version": "0.3",
"version": "0.4",
"colors": [
{
"label-value": 1,
Expand Down Expand Up @@ -556,7 +556,7 @@ For example the following JSON object defines a plate with two acquisitions and
"name": "B"
}
],
"version": "0.3",
"version": "0.4",
"wells": [
{
"path": "A/1",
Expand Down Expand Up @@ -730,7 +730,7 @@ the last two fields of view were part of the second acquisition.
"path": "3"
}
],
"version": "0.3"
"version": "0.4"
}
```

Expand Down Expand Up @@ -803,9 +803,9 @@ Note: If you would like to see your project listed, please open an issue or PR o
Citing {#citing}
================

[Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.](https://ngff.openmicroscopy.org/0.3)
J. Moore, *et al*. Editors. Open Microscopy Environment Consortium, 24 August 2021.
This edition of the specification is [https://ngff.openmicroscopy.org/0.3/](https://ngff.openmicroscopy.org/0.3/]).
[Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.](https://ngff.openmicroscopy.org/0.4)
J. Moore, *et al*. Editors. Open Microscopy Environment Consortium, 8 February 2022.
This edition of the specification is [https://ngff.openmicroscopy.org/0.4/](https://ngff.openmicroscopy.org/0.4/]).
The latest edition is available at [https://ngff.openmicroscopy.org/latest/](https://ngff.openmicroscopy.org/latest/).
[(doi:10.5281/zenodo.4282107)](https://doi.org/10.5281/zenodo.4282107)

Expand All @@ -820,6 +820,16 @@ Version History {#history}
<td>Description</td>
</tr>
</thead>
<tr>
<td>0.4.0</td>
<td>2022-02-08</td>
<td>multiscales: add axes type, units and coordinateTransformations</td>
</tr>
<tr>
<td>0.4.0</td>
<td>2022-02-08</td>
<td>plate: add rowIndex/columnIndex </td>
</tr>
<tr>
<td>0.3.0</td>
<td>2021-08-24</td>
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